Model info
Transcription factorPBX3
ModelPBX3_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length23
Quality
A
Motif rank
0
ConsensusdGAbdGRCRKbnvnnnnvvSSMv
Best auROC (human)0.9802181870129643
Best auROC (mouse)
Peak sets in benchmark (human)17
Peak sets in benchmark (mouse)
Aligned words504
TF familyTALE-type homeo domain factors{3.1.4}
TF subfamilyPBX{3.1.4.4}
HGNC8634
EntrezGene5090
UniProt IDPBX3_HUMAN
UniProt ACP40426
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.44581
0.0005 7.4725600000000005
0.0001 11.76871
GTEx tissue expression atlas PBX3 expression
ReMap ChIP-seq dataset list PBX3 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
016.2010.79871.5430.01.011.67252.5862.89811.719.60364.9291.1252.0381.702271.2260.96
0214.2621.743.0561.90111.9870.7980.00.99439.8983.69916.6870.03.8450.01.1380.0
0314.19122.726165.075168.0010.02.042.6561.5410.08.1429.6933.0450.00.02.8910.0
042.8232.0813.9115.37519.5049.17749.06355.16517.45735.87615.294111.68711.4383.95553.839103.356
053.5660.047.6560.03.3321.02246.7340.012.4710.0109.6360.02.0170.0271.7161.85
0612.9790.08.4070.00.00.01.0220.0312.2231.857158.7392.9220.00.00.01.85
072.772291.9726.22924.2290.00.7561.10.00.0161.4271.6485.0940.04.7720.00.0
081.8650.00.9070.0271.6953.994157.88125.3581.6772.034.3620.9077.7090.015.8975.717
098.45423.206235.61715.6690.01.9473.1440.9339.05818.998121.57629.4150.996.60716.1848.201
101.5365.43210.740.7946.64510.10315.45818.55344.404150.178153.97627.9631.09416.95529.4616.709
1117.57311.19416.1978.71525.97668.88142.32845.48250.02987.93545.1426.5323.81215.57119.54315.093
1214.09718.21949.88515.18941.22252.86664.27525.21916.81354.80745.3666.22313.83425.95437.96218.071
1317.0820.15134.56114.17227.04652.92829.2242.65138.57588.01748.38522.5123.83827.87420.12512.864
1422.71614.93335.02513.86553.84637.6557.97539.50123.83440.72545.3322.40116.16417.89937.50220.633
1528.38320.07854.96413.13516.65231.24830.35932.94926.76262.23957.59829.2335.87927.50336.2426.778
1619.15715.93328.88113.70526.3536.32531.09647.29822.97571.70355.60828.8755.87534.09433.47928.648
1716.20114.25340.1743.72859.49429.67155.9212.96833.82425.39780.8868.95531.12721.76259.4646.174
1840.51516.38471.76611.98231.37314.52130.35214.83757.64653.62294.87630.32.8645.60115.4697.891
1911.97789.05618.16213.2045.53459.31811.6313.6467.209169.35124.17611.7270.95842.88514.8056.361
205.0839.4234.9556.21724.908300.2923.13312.289.18436.88118.2244.4853.81732.8598.2610.0
2117.9623.80517.4643.761281.84146.74516.74734.1218.099.38322.0285.0729.4975.2977.4020.785
22223.5725.37156.38122.06836.83813.06413.6011.7277.75817.6423.86214.38219.8668.7549.6325.487
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.569-3.2830.821-4.4-3.119-2.7320.515-2.265-0.961-1.1530.725-3.04-2.568-2.7172.15-3.156
02-0.77-2.699-2.218-2.626-0.939-3.283-4.4-3.1342.633-2.047-0.617-4.4-2.011-4.4-3.032-4.4
03-0.7751.3591.6541.672-4.4-2.567-2.341-2.797-4.4-1.311-1.144-2.221-4.4-4.4-2.267-4.4
04-2.288-2.55-1.996-1.703-0.464-1.1960.4470.563-0.5730.136-0.7021.265-0.984-1.9860.5391.188
05-2.08-4.40.418-4.4-2.14-3.110.398-4.4-0.9-4.41.246-4.4-2.577-4.42.152-2.649
06-0.862-4.4-1.28-4.4-4.4-4.4-3.11-4.42.291-2.6461.615-2.257-4.4-4.4-4.4-2.649
07-2.3042.224-1.565-0.251-4.4-3.319-3.057-4.4-4.41.632-2.743-1.753-4.4-1.813-4.4-4.4
08-2.642-4.4-3.196-4.42.152-1.9771.61-0.206-2.729-2.571-1.896-3.195-1.363-4.4-0.664-1.645
09-1.275-0.2932.009-0.678-4.4-2.606-2.192-3.175-1.209-0.491.349-0.06-3.133-1.509-0.647-1.304
10-2.8-1.693-1.045-3.287-1.504-1.104-0.691-0.5130.3481.561.585-0.11-3.061-0.601-0.058-1.495
11-0.566-1.005-0.646-1.246-0.1820.7840.30.3710.4661.0270.364-0.161-2.019-0.684-0.462-0.715
12-0.781-0.5310.463-0.7090.2740.5210.715-0.212-0.6090.5570.369-1.566-0.8-0.1830.192-0.539
13-0.594-0.4320.1-0.776-0.1430.522-0.0660.3080.2081.0280.433-0.323-2.013-0.113-0.433-0.87
14-0.314-0.7250.113-0.7970.5390.1840.6120.232-0.2670.2620.368-0.328-0.648-0.5480.18-0.409
15-0.095-0.4360.559-0.85-0.619-0.0-0.0290.052-0.1530.6830.606-0.066-1.619-0.1260.146-0.152
16-0.482-0.662-0.078-0.809-0.1680.149-0.0050.41-0.3030.8240.571-0.078-1.620.0860.068-0.086
17-0.646-0.770.248-2.0390.638-0.0510.576-0.8620.078-0.2050.943-1.22-0.004-0.3570.638-1.573
180.257-0.6350.824-0.9390.004-0.752-0.029-0.7310.6070.5351.102-0.03-2.275-1.664-0.691-1.341
19-0.9391.039-0.534-0.845-1.6760.635-0.968-0.813-1.4271.68-0.253-0.96-3.1570.313-0.733-1.545
20-1.755-1.171-1.778-1.566-0.2242.252-0.296-0.915-1.1960.164-0.531-1.871-2.0180.05-1.297-4.4
21-0.545-2.021-0.572-2.0312.1880.399-0.6130.087-0.538-1.175-0.345-1.757-1.163-1.716-1.402-3.294
221.957-0.2060.585-0.3430.163-0.855-0.816-2.705-1.357-0.562-0.266-0.762-0.446-1.241-1.15-1.684