Model info
Transcription factorPBX3
ModelPBX3_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
A
Motif rank
1
ConsensusYSAKTGGCh
Best auROC (human)0.9224531423907697
Best auROC (mouse)
Peak sets in benchmark (human)17
Peak sets in benchmark (mouse)
Aligned words500
TF familyTALE-type homeo domain factors{3.1.4}
TF subfamilyPBX{3.1.4.4}
HGNC8634
EntrezGene5090
UniProt IDPBX3_HUMAN
UniProt ACP40426
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.186204999999999
0.0005 6.080715
0.0001 7.692919999999999
GTEx tissue expression atlas PBX3 expression
ReMap ChIP-seq dataset list PBX3 datasets
Motifs in JASPAR
PCM
ACGT
0125.0114.026.0335.0
0211.087.0365.037.0
03487.04.09.00.0
047.051.072.0370.0
057.03.020.0470.0
061.00.0499.00.0
07187.02.0311.00.0
0821.0391.07.081.0
09192.079.068.0161.0
PWM
ACGT
01-1.561-0.091-1.5250.978
02-2.311-0.3571.063-1.189
031.351-3.126-2.484-4.4
04-2.694-0.879-0.5431.077
05-2.694-3.325-1.771.315
06-3.903-4.41.375-4.4
070.399-3.5730.904-4.4
08-1.7251.132-2.694-0.427
090.425-0.452-0.5990.25