Model info
Transcription factorPbx3
ModelPBX3_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length14
Quality
A
Motif rank
0
ConsensusbbbYSATTGGYddv
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words1885
TF familyTALE-type homeo domain factors{3.1.4}
TF subfamilyPBX{3.1.4.4}
MGI97496
EntrezGene18516
UniProt IDPBX3_MOUSE
UniProt ACO35317
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.92956
0.0005 5.98916
0.0001 7.98826
GTEx tissue expression atlas Pbx3 expression
Motifs in JASPAR
PCM
ACGT
01202.184700.668314.819627.846
02135.557405.945512.668791.347
03113.088721.09330.884680.456
04115.094329.8340.2871360.306
0510.837394.5441338.816101.319
061801.7340.08.82934.955
070.057.538153.7121634.267
080.9540.014.41830.163
090.01.7121825.73218.074
10689.7890.4811155.2470.0
11240.749953.45645.487605.826
12335.907292.972357.974858.665
13332.538173.981957.016381.982
14425.073330.877790.546299.022
PWM
ACGT
01-0.820.416-0.380.307
02-1.215-0.1270.1050.538
03-1.3940.445-0.3310.387
04-1.376-0.334-2.3971.079
05-3.595-0.1561.063-1.502
061.359-5.507-3.767-2.532
07-5.507-2.054-1.0911.262
08-5.096-5.507-3.3481.375
09-5.507-4.861.372-3.145
100.401-5.2790.915-5.507
11-0.6470.724-2.280.271
12-0.316-0.452-0.2530.619
13-0.326-0.9690.727-0.188
14-0.082-0.3310.537-0.432