Model info
Transcription factorPHOX2A
ModelPHX2A_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusTAATYTAATTA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words7919
TF familyPaired-related HD factors{3.1.3}
TF subfamilyPHOX{3.1.3.18}
HGNC691
EntrezGene401
UniProt IDPHX2A_HUMAN
UniProt ACO14813
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.508575
0.0005 4.90699
0.0001 7.650265
GTEx tissue expression atlas PHOX2A expression
ReMap ChIP-seq dataset list PHOX2A datasets
Motifs in JASPAR
PCM
ACGT
01554.75218.75128.757009.75
027287.2561.25343.25220.25
037831.530.527.522.5
04276.251263.25121.256251.25
05127.02803.0754.04228.0
060.02584.00.05328.0
076494.0109.01263.046.0
087820.519.552.519.5
090.751.751.757907.75
10227.5101.59.57573.5
117248.581.5178.5403.5
PWM
ACGT
01-1.268-2.193-2.7161.264
021.303-3.44-1.746-2.186
031.375-4.102-4.198-4.382
04-1.962-0.448-2.7751.15
05-2.7290.348-0.9630.759
06-6.7830.267-6.7830.99
071.188-2.879-0.448-3.715
081.374-4.512-3.588-4.512
09-6.494-6.206-6.2061.385
10-2.154-2.949-5.1281.342
111.298-3.163-2.394-1.585