Model info
Transcription factorPITX2
ModelPITX2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
D
Motif rank
0
ConsensusYKGGATTWvh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words17
TF familyPaired-related HD factors{3.1.3}
TF subfamilyPITX{3.1.3.19}
HGNC9005
EntrezGene5308
UniProt IDPITX2_HUMAN
UniProt ACQ99697
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.47725
0.0005 6.1096
0.0001 7.379569999999999
GTEx tissue expression atlas PITX2 expression
ReMap ChIP-seq dataset list PITX2 datasets
Motifs in JASPAR
PCM
ACGT
010.954.0122.9579.081
021.9010.958.0256.124
032.0060.014.0430.95
040.00.017.00.0
0514.0432.9570.00.0
060.00.00.017.0
070.00.00.9516.05
0811.9320.950.04.118
096.9695.1743.8011.056
106.1513.32.1385.411
PWM
ACGT
01-1.095-0.049-0.3020.68
02-0.642-1.0950.5660.321
03-0.602-1.9461.09-1.095
04-1.946-1.9461.273-1.946
051.09-0.302-1.946-1.946
06-1.946-1.946-1.9461.273
07-1.946-1.946-1.0951.218
080.936-1.095-1.946-0.027
090.4370.171-0.095-1.033
100.324-0.213-0.5550.21