Model info
Transcription factorPitx2
ModelPITX2_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
D
Motif rank
0
ConsensusYKGGATTWvh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words17
TF familyPaired-related HD factors{3.1.3}
TF subfamilyPITX{3.1.3.19}
MGI109340
EntrezGene18741
UniProt IDPITX2_MOUSE
UniProt ACP97474
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.422855
0.0005 6.04075
0.0001 7.291535
GTEx tissue expression atlas Pitx2 expression
Motifs in JASPAR
PCM
ACGT
010.954.0122.9579.081
021.9010.958.0256.124
032.0060.014.0430.95
040.00.017.00.0
0514.0432.9570.00.0
060.00.00.017.0
070.00.00.9516.05
0811.9320.950.04.118
096.9695.1743.8011.056
106.1513.32.1385.411
PWM
ACGT
01-1.095-0.049-0.3020.68
02-0.642-1.0950.5660.321
03-0.602-1.9461.09-1.095
04-1.946-1.9461.273-1.946
051.09-0.302-1.946-1.946
06-1.946-1.946-1.9461.273
07-1.946-1.946-1.0951.218
080.936-1.095-1.946-0.027
090.4370.171-0.095-1.033
100.324-0.213-0.5550.21