Model info
Transcription factorPlag1
ModelPLAG1_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length17
Quality
D
Motif rank
0
ConsensusRGGGGSMhndRdMGGGK
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words25
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyPLAG factors{2.3.3.25}
MGI1891916
EntrezGene56711
UniProt IDPLAG1_MOUSE
UniProt ACQ9QYE0
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.33786
0.0005 5.22316
0.0001 7.0575600000000005
GTEx tissue expression atlas Plag1 expression
Motifs in JASPAR
PCM
ACGT
015.50.516.52.5
025.00.020.00.0
0310.00.015.00.0
040.00.025.00.0
050.08.017.00.0
061.014.07.03.0
0713.09.02.01.0
085.08.03.09.0
095.08.06.06.0
1011.02.05.07.0
118.06.011.00.0
124.02.012.07.0
1317.04.03.01.0
142.00.020.03.0
151.00.024.00.0
160.00.025.00.0
172.01.017.05.0
PWM
ACGT
01-0.112-1.6880.897-0.758
02-0.195-2.1711.081-2.171
030.426-2.1710.807-2.171
04-2.171-2.1711.297-2.171
05-2.1710.2220.926-2.171
06-1.3630.7410.101-0.617
070.6710.329-0.922-1.363
08-0.1950.222-0.6170.329
09-0.1950.222-0.036-0.036
100.515-0.922-0.1950.101
110.222-0.0360.515-2.171
12-0.384-0.9220.5960.101
130.926-0.384-0.617-1.363
14-0.922-2.1711.081-0.617
15-1.363-2.1711.257-2.171
16-2.171-2.1711.297-2.171
17-0.922-1.3630.926-0.195