Model info
Transcription factorPLAGL1
ModelPLAL1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length10
Quality
D
Motif rank
0
ConsensusvRGGGGGCCY
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words12
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyPLAG factors{2.3.3.25}
HGNC9046
EntrezGene5325
UniProt IDPLAL1_HUMAN
UniProt ACQ9UM63
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.441825
0.0005 5.1847449999999995
0.0001 6.746360000000001
GTEx tissue expression atlas PLAGL1 expression
ReMap ChIP-seq dataset list PLAGL1 datasets
Motifs in JASPAR
PCM
ACGT
012.1177.2942.1170.471
024.1150.07.0620.823
030.00.09.5312.469
041.6460.010.3540.0
050.8230.011.1770.0
060.00.012.00.0
070.00.012.00.0
080.011.1770.00.823
090.82310.3540.00.823
100.8237.0621.6462.469
PWM
ACGT
01-0.2790.782-0.279-1.198
020.268-1.7630.752-0.919
03-1.763-1.7631.031-0.159
04-0.468-1.7631.109-1.763
05-0.919-1.7631.181-1.763
06-1.763-1.7631.249-1.763
07-1.763-1.7631.249-1.763
08-1.7631.181-1.763-0.919
09-0.9191.109-1.763-0.919
10-0.9190.752-0.468-0.159