Model info
| Transcription factor | POU3F1 (GeneCards) | ||||||||
| Model | PO3F1_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | Integrative | ||||||||
| Model release | HOCOMOCOv9 | ||||||||
| Model length | 14 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | vRTKSTWATGCWWd | ||||||||
| Best auROC (human) | |||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | |||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 16 | ||||||||
| TF family | POU domain factors {3.1.10} | ||||||||
| TF subfamily | POU3 (Oct-6-like factors) {3.1.10.3} | ||||||||
| HGNC | HGNC:9214 | ||||||||
| EntrezGene | GeneID:5453 (SSTAR profile) | ||||||||
| UniProt ID | PO3F1_HUMAN | ||||||||
| UniProt AC | Q03052 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | POU3F1 expression | ||||||||
| ReMap ChIP-seq dataset list | POU3F1 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 4.875 | 5.148 | 4.193 | 0.784 |
| 02 | 8.864 | 0.0 | 3.75 | 2.386 |
| 03 | 1.364 | 0.0 | 0.682 | 12.955 |
| 04 | 1.364 | 0.0 | 5.864 | 7.773 |
| 05 | 1.023 | 4.5 | 7.773 | 1.705 |
| 06 | 5.864 | 0.0 | 0.0 | 9.136 |
| 07 | 9.068 | 0.0 | 1.227 | 4.705 |
| 08 | 14.318 | 0.0 | 0.0 | 0.682 |
| 09 | 0.909 | 0.227 | 0.909 | 12.955 |
| 10 | 1.364 | 0.682 | 12.273 | 0.682 |
| 11 | 0.909 | 11.818 | 2.273 | 0.0 |
| 12 | 9.0 | 0.0 | 2.727 | 3.273 |
| 13 | 8.818 | 0.682 | 1.591 | 3.909 |
| 14 | 6.477 | 1.295 | 3.205 | 4.023 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.226 | 0.274 | 0.095 | -1.109 |
| 02 | 0.768 | -1.878 | 0.0 | -0.368 |
| 03 | -0.774 | -1.878 | -1.181 | 1.125 |
| 04 | -0.774 | -1.878 | 0.39 | 0.646 |
| 05 | -0.957 | 0.157 | 0.646 | -0.62 |
| 06 | 0.39 | -1.878 | -1.878 | 0.796 |
| 07 | 0.789 | -1.878 | -0.844 | 0.195 |
| 08 | 1.22 | -1.878 | -1.878 | -1.181 |
| 09 | -1.026 | -1.588 | -1.026 | 1.125 |
| 10 | -0.774 | -1.181 | 1.073 | -1.181 |
| 11 | -1.026 | 1.038 | -0.406 | -1.878 |
| 12 | 0.782 | -1.878 | -0.263 | -0.114 |
| 13 | 0.763 | -1.181 | -0.669 | 0.035 |
| 14 | 0.48 | -0.808 | -0.131 | 0.06 |