Model info
Transcription factorPou3f2
ModelPO3F2_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
1
ConsensusdbSWYMTGAATAWKbAW
Best auROC (human)0.7772881011855717
Best auROC (mouse)0.9339314474626327
Peak sets in benchmark (human)12
Peak sets in benchmark (mouse)22
Aligned words284
TF familyPOU domain factors{3.1.10}
TF subfamilyPOU3 (Oct-6-like factors){3.1.10.3}
MGI101895
EntrezGene18992
UniProt IDPO3F2_MOUSE
UniProt ACP31360
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.90836
0.0005 5.0785599999999995
0.0001 7.501810000000001
GTEx tissue expression atlas Pou3f2 expression
Motifs in JASPAR
PCM
ACGT
0190.035.0115.044.0
0243.054.061.0126.0
0314.0138.0102.030.0
0465.040.013.0166.0
0520.0216.07.041.0
06215.040.01.028.0
0711.01.06.0266.0
088.00.0276.00.0
09187.095.02.00.0
10281.00.00.03.0
110.00.00.0284.0
12244.01.028.011.0
1356.049.05.0174.0
1426.06.048.0204.0
1512.0154.072.046.0
16229.050.02.03.0
1794.06.014.0170.0
PWM
ACGT
010.233-0.6870.475-0.467
02-0.489-0.268-0.1490.565
03-1.5470.6550.356-0.835
04-0.086-0.559-1.6140.838
05-1.2181.099-2.153-0.535
061.095-0.559-3.402-0.901
07-1.764-3.402-2.2791.306
08-2.04-3.9371.343-3.937
090.9560.286-3.055-3.937
101.361-3.937-3.937-2.798
11-3.937-3.937-3.9371.372
121.221-3.402-0.901-1.764
13-0.232-0.362-2.4240.885
14-0.971-2.279-0.3821.043
15-1.6860.7640.014-0.423
161.157-0.342-3.055-2.798
170.276-2.279-1.5470.862