Model info
Transcription factorPOU4F2
ModelPO4F2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
D
Motif rank
0
ConsensusYvTTAATGAKhnn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words31
TF familyPOU domain factors{3.1.10}
TF subfamilyPOU4 (Brn-3-like factors){3.1.10.4}
HGNC9219
EntrezGene5458
UniProt IDPO4F2_HUMAN
UniProt ACQ12837
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.370675
0.0005 6.205914999999999
0.0001 7.93642
GTEx tissue expression atlas POU4F2 expression
ReMap ChIP-seq dataset list POU4F2 datasets
Motifs in JASPAR
PCM
ACGT
012.2978.4210.76615.736
0213.9923.8286.1243.275
030.05.3590.021.861
040.00.00.027.219
0527.2190.00.00.0
0627.2190.00.00.0
070.00.00.027.219
080.00.020.1177.103
0923.1790.02.511.531
100.02.89218.3735.954
113.27512.2481.53110.165
124.0414.5934.04114.545
132.2972.29711.48311.143
PWM
ACGT
01-0.8940.192-1.5680.775
020.664-0.495-0.093-0.621
03-2.223-0.21-2.2231.09
04-2.223-2.223-2.2231.302
051.302-2.223-2.223-2.223
061.302-2.223-2.223-2.223
07-2.223-2.223-2.2231.302
08-2.223-2.2231.010.038
091.146-2.223-0.828-1.175
10-2.223-0.7190.923-0.118
11-0.6210.538-1.1750.365
12-0.45-0.342-0.450.7
13-0.894-0.8940.4780.45