Model info
Transcription factorPou4f2
ModelPO4F2_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
D
Motif rank
0
ConsensusYvTTAATGAKhnn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words31
TF familyPOU domain factors{3.1.10}
TF subfamilyPOU4 (Brn-3-like factors){3.1.10.4}
MGI102524
EntrezGene18997
UniProt IDPO4F2_MOUSE
UniProt ACQ63934
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.264664999999999
0.0005 6.1027249999999995
0.0001 7.84283
GTEx tissue expression atlas Pou4f2 expression
Motifs in JASPAR
PCM
ACGT
012.2978.4210.76615.736
0213.9923.8286.1243.275
030.05.3590.021.861
040.00.00.027.219
0527.2190.00.00.0
0627.2190.00.00.0
070.00.00.027.219
080.00.020.1177.103
0923.1790.02.511.531
100.02.89218.3735.954
113.27512.2481.53110.165
124.0414.5934.04114.545
132.2972.29711.48311.143
PWM
ACGT
01-0.8940.192-1.5680.775
020.664-0.495-0.093-0.621
03-2.223-0.21-2.2231.09
04-2.223-2.223-2.2231.302
051.302-2.223-2.223-2.223
061.302-2.223-2.223-2.223
07-2.223-2.223-2.2231.302
08-2.223-2.2231.010.038
091.146-2.223-0.828-1.175
10-2.223-0.7190.923-0.118
11-0.6210.538-1.1750.365
12-0.45-0.342-0.450.7
13-0.894-0.8940.4780.45