Model info
Transcription factorPOU5F1
ModelPO5F1_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusbYWTTvWhATGYARAh
Best auROC (human)0.9768386136515343
Best auROC (mouse)0.9815242612266646
Peak sets in benchmark (human)44
Peak sets in benchmark (mouse)119
Aligned words501
TF familyPOU domain factors{3.1.10}
TF subfamilyPOU5 (Oct-3/4-like factors){3.1.10.5}
HGNC9221
EntrezGene5460
UniProt IDPO5F1_HUMAN
UniProt ACQ01860
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.1955100000000005
0.0005 6.17716
0.0001 8.22521
GTEx tissue expression atlas POU5F1 expression
ReMap ChIP-seq dataset list POU5F1 datasets
Motifs in JASPAR
PCM
ACGT
0126.0260.097.0117.0
0237.0265.040.0158.0
03195.022.020.0263.0
0410.032.012.0446.0
0536.011.014.0439.0
0652.0157.0258.033.0
07190.018.016.0276.0
0888.0125.050.0237.0
09442.010.016.032.0
107.01.08.0484.0
116.04.0461.029.0
127.0380.047.066.0
13395.010.015.080.0
14310.030.0127.033.0
15415.018.034.033.0
1680.069.061.0290.0
PWM
ACGT
01-1.5250.726-0.25-0.065
02-1.1890.745-1.1140.232
030.44-1.681-1.770.737
04-2.394-1.328-2.2341.263
05-1.215-2.311-2.0961.247
06-0.860.2250.718-1.298
070.415-1.868-1.9750.785
08-0.3460.0-0.8980.634
091.254-2.394-1.975-1.328
10-2.694-3.903-2.5841.345
11-2.819-3.1261.296-1.421
12-2.6941.104-0.958-0.628
131.142-2.394-2.034-0.439
140.901-1.3890.016-1.298
151.191-1.868-1.27-1.298
16-0.439-0.584-0.7050.835