Model info
Transcription factorPOU5F1
ModelPO5F1_HUMAN.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
1
ConsensusdnATGCAvWb
Best auROC (human)0.8881693048433962
Best auROC (mouse)0.8761137637333695
Peak sets in benchmark (human)44
Peak sets in benchmark (mouse)119
Aligned words485
TF familyPOU domain factors{3.1.10}
TF subfamilyPOU5 (Oct-3/4-like factors){3.1.10.5}
HGNC9221
EntrezGene5460
UniProt IDPO5F1_HUMAN
UniProt ACQ01860
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.58802
0.0005 6.21744
0.0001 7.95363
GTEx tissue expression atlas POU5F1 expression
ReMap ChIP-seq dataset list POU5F1 datasets
Motifs in JASPAR
PCM
ACGT
01216.025.084.0159.0
02144.0144.043.0153.0
03440.028.03.013.0
0426.07.020.0431.0
057.010.0464.03.0
067.0422.046.09.0
07407.013.040.024.0
08194.0137.0109.044.0
09369.034.039.042.0
1081.086.0100.0217.0
PWM
ACGT
010.574-1.53-0.3590.27
020.1720.172-1.0120.232
031.282-1.423-3.294-2.131
04-1.493-2.663-1.7381.261
05-2.663-2.3621.335-3.294
06-2.6631.24-0.947-2.453
071.204-2.131-1.082-1.568
080.4670.123-0.103-0.99
091.106-1.238-1.106-1.035
10-0.395-0.336-0.1880.579