Model info
Transcription factorPou5f1
ModelPO5F1_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusbYWTTSWhATGYWRAW
Best auROC (human)0.9801812174276552
Best auROC (mouse)0.9851786433369675
Peak sets in benchmark (human)44
Peak sets in benchmark (mouse)119
Aligned words499
TF familyPOU domain factors{3.1.10}
TF subfamilyPOU5 (Oct-3/4-like factors){3.1.10.5}
MGI101893
EntrezGene18999
UniProt IDPO5F1_MOUSE
UniProt ACP20263
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.72436
0.0005 5.80611
0.0001 8.04306
GTEx tissue expression atlas Pou5f1 expression
Motifs in JASPAR
PCM
ACGT
0127.0246.0115.0111.0
0230.0259.023.0187.0
03263.09.08.0219.0
046.010.07.0476.0
0524.03.029.0443.0
0649.0114.0301.035.0
07163.08.07.0321.0
08113.0110.071.0205.0
09431.05.014.049.0
101.02.01.0495.0
113.00.0460.036.0
1210.0362.035.092.0
13335.09.09.0146.0
14348.020.081.050.0
15452.09.021.017.0
1695.038.069.0297.0
PWM
ACGT
01-1.4870.673-0.08-0.115
02-1.3870.724-1.6380.401
030.739-2.482-2.5820.557
04-2.817-2.392-2.6921.33
05-1.598-3.323-1.4191.258
06-0.916-0.0890.874-1.24
070.265-2.582-2.6920.938
08-0.098-0.124-0.5540.492
091.231-2.959-2.094-0.916
10-3.901-3.571-3.9011.369
11-3.323-4.3981.296-1.213
12-2.3921.057-1.24-0.3
130.98-2.482-2.4820.156
141.018-1.768-0.425-0.896
151.278-2.482-1.723-1.918
16-0.269-1.161-0.5820.86