Model info
Transcription factorPou5f1
ModelPO5F1_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length9
Quality
A
Motif rank
1
ConsensushWTGCWRAh
Best auROC (human)0.8730482739741089
Best auROC (mouse)0.8770985238076472
Peak sets in benchmark (human)44
Peak sets in benchmark (mouse)119
Aligned words498
TF familyPOU domain factors{3.1.10}
TF subfamilyPOU5 (Oct-3/4-like factors){3.1.10.5}
MGI101893
EntrezGene18999
UniProt IDPO5F1_MOUSE
UniProt ACP20263
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.81057
0.0005 6.38888
0.0001 7.46364
GTEx tissue expression atlas Pou5f1 expression
Motifs in JASPAR
PCM
ACGT
01143.0101.039.0215.0
02336.040.036.086.0
035.01.027.0465.0
045.02.0362.0129.0
054.0407.046.041.0
06322.08.00.0168.0
07321.019.0131.027.0
08436.06.040.016.0
0983.082.070.0263.0
PWM
ACGT
010.137-0.206-1.1340.541
020.985-1.11-1.211-0.364
03-2.957-3.9-1.4851.309
04-2.957-3.5691.0590.035
05-3.1221.176-0.975-1.086
060.943-2.58-4.3970.296
070.94-1.8140.05-1.485
081.244-2.815-1.11-1.971
09-0.399-0.411-0.5660.741