Model info
Transcription factorPOU6F1
ModelPO6F1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
D
Motif rank
0
ConsensusnATAATTTATGCR
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words14
TF familyPOU domain factors{3.1.10}
TF subfamilyPOU6 (Brn-5-like factors){3.1.10.6}
HGNC9224
EntrezGene5463
UniProt IDPO6F1_HUMAN
UniProt ACQ14863
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.84705
0.0005 5.72613
0.0001 7.62212
GTEx tissue expression atlas POU6F1 expression
ReMap ChIP-seq dataset list POU6F1 datasets
Motifs in JASPAR
PCM
ACGT
012.07.03.02.0
0213.01.00.00.0
030.00.00.014.0
0412.00.00.02.0
0514.00.00.00.0
065.00.00.09.0
070.02.00.012.0
080.00.00.014.0
0913.00.00.01.0
100.00.00.014.0
110.00.014.00.0
120.012.00.02.0
137.02.05.00.0
PWM
ACGT
01-0.4470.611-0.128-0.447
021.189-0.919-1.841-1.841
03-1.841-1.841-1.8411.26
041.113-1.841-1.841-0.447
051.26-1.841-1.841-1.841
060.308-1.841-1.8410.843
07-1.841-0.447-1.8411.113
08-1.841-1.841-1.8411.26
091.189-1.841-1.841-0.919
10-1.841-1.841-1.8411.26
11-1.841-1.8411.26-1.841
12-1.8411.113-1.841-0.447
130.611-0.4470.308-1.841