Model info
Transcription factorPou6f1
ModelPO6F1_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length13
Quality
D
Motif rank
0
ConsensusnATAATTTATGCR
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words14
TF familyPOU domain factors{3.1.10}
TF subfamilyPOU6 (Brn-5-like factors){3.1.10.6}
MGI102935
EntrezGene19009
UniProt IDPO6F1_MOUSE
UniProt ACQ07916
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.682684999999999
0.0005 5.473520000000001
0.0001 7.404515
GTEx tissue expression atlas Pou6f1 expression
Motifs in JASPAR
PCM
ACGT
012.07.03.02.0
0213.01.00.00.0
030.00.00.014.0
0412.00.00.02.0
0514.00.00.00.0
065.00.00.09.0
070.02.00.012.0
080.00.00.014.0
0913.00.00.01.0
100.00.00.014.0
110.00.014.00.0
120.012.00.02.0
137.02.05.00.0
PWM
ACGT
01-0.4470.611-0.128-0.447
021.189-0.919-1.841-1.841
03-1.841-1.841-1.8411.26
041.113-1.841-1.841-0.447
051.26-1.841-1.841-1.841
060.308-1.841-1.8410.843
07-1.841-0.447-1.8411.113
08-1.841-1.841-1.8411.26
091.189-1.841-1.841-0.919
10-1.841-1.841-1.8411.26
11-1.841-1.8411.26-1.841
12-1.8411.113-1.841-0.447
130.611-0.4470.308-1.841