Model info
Transcription factorPPARA
ModelPPARA_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
B
Motif rank
0
ConsensushWbKRGGbbARAGGKYR
Best auROC (human)0.5755294813176998
Best auROC (mouse)0.9558648682455894
Peak sets in benchmark (human)5
Peak sets in benchmark (mouse)20
Aligned words500
TF familyThyroid hormone receptor-related factors (NR1){2.1.2}
TF subfamilyPPAR (NR1C){2.1.2.5}
HGNC9232
EntrezGene5465
UniProt IDPPARA_HUMAN
UniProt ACQ07869
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.031359999999999
0.0005 5.9406099999999995
0.0001 7.8178600000000005
GTEx tissue expression atlas PPARA expression
ReMap ChIP-seq dataset list PPARA datasets
Motifs in JASPAR
PCM
ACGT
01246.0108.063.083.0
02267.012.044.0177.0
0341.0211.0184.064.0
0431.058.076.0335.0
05222.015.0234.029.0
0647.01.0419.033.0
0774.06.0401.019.0
0861.091.0194.0154.0
0951.0259.0131.059.0
10462.09.027.02.0
11326.021.0128.025.0
12406.00.094.00.0
1366.02.0414.018.0
1429.04.0402.065.0
1520.059.0126.0295.0
1637.0307.076.080.0
17362.041.049.048.0
PWM
ACGT
010.671-0.144-0.673-0.403
020.752-2.234-1.0220.344
03-1.090.5190.383-0.658
04-1.358-0.754-0.490.978
050.569-2.0340.621-1.421
06-0.958-3.9031.201-1.298
07-0.516-2.8191.157-1.818
08-0.705-0.3130.4350.206
09-0.8790.7220.046-0.737
101.298-2.484-1.489-3.573
110.951-1.7250.023-1.561
121.17-4.4-0.281-4.4
13-0.628-3.5731.189-1.868
14-1.421-3.1261.16-0.643
15-1.77-0.7370.0080.852
16-1.1890.891-0.49-0.439
171.055-1.09-0.918-0.938