Model info
Transcription factorPPARD
ModelPPARD_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length14
Quality
D
Motif rank
0
ConsensusYAGKnnAMAGGWYA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words18
TF familyThyroid hormone receptor-related factors (NR1){2.1.2}
TF subfamilyPPAR (NR1C){2.1.2.5}
HGNC9235
EntrezGene5467
UniProt IDPPARD_HUMAN
UniProt ACQ03181
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.09206
0.0005 5.83266
0.0001 7.393935000000001
GTEx tissue expression atlas PPARD expression
ReMap ChIP-seq dataset list PPARD datasets
Motifs in JASPAR
PCM
ACGT
011.5096.5381.5098.438
0213.1880.03.6881.118
030.01.11816.8760.0
041.0061.11813.8592.012
056.1474.3594.3593.129
063.1296.7064.3593.8
0713.7473.2410.01.006
0810.0593.9123.0181.006
0915.8710.01.1181.006
100.00.017.3240.671
111.1180.015.8711.006
122.6820.7821.11813.412
131.67613.0761.1182.124
1413.2440.1683.5211.062
PWM
ACGT
01-0.850.33-0.850.562
020.98-1.978-0.169-1.043
03-1.978-1.0431.215-1.978
04-1.106-1.0431.027-0.647
050.274-0.027-0.027-0.304
06-0.3040.353-0.027-0.144
071.019-0.276-1.978-1.106
080.725-0.119-0.334-1.106
091.156-1.978-1.043-1.106
10-1.978-1.9781.24-1.321
11-1.043-1.9781.156-1.106
12-0.427-1.244-1.0430.996
13-0.7780.972-1.043-0.607
140.984-1.769-0.207-1.074