Model info
Transcription factorPpard
ModelPPARD_MOUSE.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length14
Quality
D
Motif rank
0
ConsensusYAGKnnAMAGGWYA
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words18
TF familyThyroid hormone receptor-related factors (NR1){2.1.2}
TF subfamilyPPAR (NR1C){2.1.2.5}
MGI101884
EntrezGene19015
UniProt IDPPARD_MOUSE
UniProt ACP35396
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.14761
0.0005 5.89281
0.0001 7.450429999999999
GTEx tissue expression atlas Ppard expression
Motifs in JASPAR
PCM
ACGT
011.5096.5381.5098.438
0213.1880.03.6881.118
030.01.11816.8760.0
041.0061.11813.8592.012
056.1474.3594.3593.129
063.1296.7064.3593.8
0713.7473.2410.01.006
0810.0593.9123.0181.006
0915.8710.01.1181.006
100.00.017.3240.671
111.1180.015.8711.006
122.6820.7821.11813.412
131.67613.0761.1182.124
1413.2440.1683.5211.062
PWM
ACGT
01-0.850.33-0.850.562
020.98-1.978-0.169-1.043
03-1.978-1.0431.215-1.978
04-1.106-1.0431.027-0.647
050.274-0.027-0.027-0.304
06-0.3040.353-0.027-0.144
071.019-0.276-1.978-1.106
080.725-0.119-0.334-1.106
091.156-1.978-1.043-1.106
10-1.978-1.9781.24-1.321
11-1.043-1.9781.156-1.106
12-0.427-1.244-1.0430.996
13-0.7780.972-1.043-0.607
140.984-1.769-0.207-1.074