Model info
Transcription factorPparg
ModelPPARG_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
A
Motif rank
0
ConsensusvnhdbbRKGbSARAGGKbRn
Best auROC (human)0.9690044651375455
Best auROC (mouse)0.9745442532246151
Peak sets in benchmark (human)53
Peak sets in benchmark (mouse)114
Aligned words498
TF familyThyroid hormone receptor-related factors (NR1){2.1.2}
TF subfamilyPPAR (NR1C){2.1.2.5}
MGI97747
EntrezGene19016
UniProt IDPPARG_MOUSE
UniProt ACP37238
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.86391
0.0005 11.707360000000001
0.0001 15.525760000000002
GTEx tissue expression atlas Pparg expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0131.021.055.010.035.082.02.044.064.024.041.042.016.03.014.014.0
0292.021.014.019.086.024.03.017.059.034.09.010.028.032.018.032.0
03146.016.042.061.066.01.05.039.026.02.08.08.024.02.016.036.0
0428.099.0100.035.02.05.07.07.012.018.027.014.08.050.065.021.0
0511.07.012.020.018.016.012.0126.09.026.041.0123.011.010.030.026.0
0617.08.024.00.045.04.03.07.044.012.028.011.096.06.0185.08.0
0729.00.0166.07.08.01.09.012.010.00.0175.055.01.00.023.02.0
086.02.035.05.00.00.00.01.051.04.0298.020.01.02.071.02.0
095.010.038.05.04.02.01.01.053.069.0133.0149.09.04.010.05.0
106.047.010.08.07.056.03.019.011.0114.042.015.013.075.061.011.0
1130.02.05.00.0279.06.05.02.0108.02.04.02.045.03.04.01.0
12305.010.0132.015.010.00.02.01.010.01.06.01.05.00.00.00.0
13277.01.050.02.010.00.01.00.0118.01.021.00.08.01.08.00.0
1425.03.0382.03.01.00.01.01.018.00.058.04.00.00.02.00.0
150.00.040.04.00.00.03.00.025.05.0333.080.00.00.07.01.0
160.00.018.07.00.00.00.05.011.040.0106.0226.00.03.017.065.0
171.08.01.01.06.026.00.011.012.080.024.025.019.0175.065.044.0
1824.09.04.01.0221.025.014.029.064.08.014.04.035.08.030.08.0
1968.0105.0105.066.015.013.01.021.015.018.011.018.04.010.09.019.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.004-0.3880.564-1.110.1160.961-2.580.3430.715-0.2560.2730.296-0.654-2.23-0.784-0.784
021.076-0.388-0.784-0.4861.008-0.256-2.23-0.5950.6340.087-1.211-1.11-0.1040.027-0.5390.027
031.536-0.6540.2960.6670.745-3.122-1.7660.223-0.177-2.58-1.324-1.324-0.256-2.58-0.6540.144
04-0.1041.1491.1590.116-2.58-1.766-1.451-1.451-0.934-0.539-0.14-0.784-1.3240.4690.73-0.388
05-1.018-1.451-0.934-0.435-0.539-0.654-0.9341.389-1.211-0.1770.2731.365-1.018-1.11-0.036-0.177
06-0.595-1.324-0.256-4.3970.365-1.971-2.23-1.4510.343-0.934-0.104-1.0181.118-1.5961.772-1.324
07-0.07-4.3971.664-1.451-1.324-3.122-1.211-0.934-1.11-4.3971.7170.564-3.122-4.397-0.298-2.58
08-1.596-2.580.116-1.766-4.397-4.397-4.397-3.1220.489-1.9712.248-0.435-3.122-2.580.818-2.58
09-1.766-1.110.197-1.766-1.971-2.58-3.122-3.1220.5270.7891.4431.556-1.211-1.971-1.11-1.766
10-1.5960.408-1.11-1.324-1.4510.582-2.23-0.486-1.0181.2890.296-0.717-0.8560.8720.667-1.018
11-0.036-2.58-1.766-4.3972.182-1.596-1.766-2.581.235-2.58-1.971-2.580.365-2.23-1.971-3.122
122.271-1.111.435-0.717-1.11-4.397-2.58-3.122-1.11-3.122-1.596-3.122-1.766-4.397-4.397-4.397
132.175-3.1220.469-2.58-1.11-4.397-3.122-4.3971.324-3.122-0.388-4.397-1.324-3.122-1.324-4.397
14-0.216-2.232.496-2.23-3.122-4.397-3.122-3.122-0.539-4.3970.617-1.971-4.397-4.397-2.58-4.397
15-4.397-4.3970.248-1.971-4.397-4.397-2.23-4.397-0.216-1.7662.3590.936-4.397-4.397-1.451-3.122
16-4.397-4.397-0.539-1.451-4.397-4.397-4.397-1.766-1.0180.2481.2171.972-4.397-2.23-0.5950.73
17-3.122-1.324-3.122-3.122-1.596-0.177-4.397-1.018-0.9340.936-0.256-0.216-0.4861.7170.730.343
18-0.256-1.211-1.971-3.1221.95-0.216-0.784-0.070.715-1.324-0.784-1.9710.116-1.324-0.036-1.324
190.7751.2071.2070.745-0.717-0.856-3.122-0.388-0.717-0.539-1.018-0.539-1.971-1.11-1.211-0.486