Model info
Transcription factorPGR
ModelPRGR_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length20
Quality
A
Motif rank
0
ConsensusnhbRKnACRKhYWGThYYhn
Best auROC (human)0.9659515520450144
Best auROC (mouse)0.981872624288046
Peak sets in benchmark (human)51
Peak sets in benchmark (mouse)15
Aligned words513
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
HGNC8910
EntrezGene5241
UniProt IDPRGR_HUMAN
UniProt ACP06401
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.92046
0.0005 10.766760000000001
0.0001 14.66976
GTEx tissue expression atlas PGR expression
ReMap ChIP-seq dataset list PGR datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0132.035.020.047.050.056.01.033.032.051.011.017.036.043.017.019.0
0227.072.036.015.042.072.08.063.06.025.08.010.09.046.047.014.0
0330.03.045.06.0142.06.026.041.062.04.027.06.017.02.066.017.0
0416.01.0182.052.04.00.06.05.019.04.0121.020.01.01.065.03.0
0517.02.016.05.00.03.00.03.0144.071.093.066.04.013.08.055.0
06147.01.09.08.078.01.01.09.0105.06.03.03.080.037.03.09.0
073.0376.015.016.01.042.01.01.00.016.00.00.00.024.01.04.0
081.00.02.01.0339.018.059.042.09.01.06.01.04.00.015.02.0
0931.048.052.0222.01.04.00.014.02.010.07.063.02.04.09.031.0
1013.09.06.08.011.021.07.027.07.021.08.032.036.072.042.0180.0
110.052.012.03.00.086.01.036.01.050.08.04.02.0190.013.042.0
121.01.00.01.059.026.022.0271.04.03.03.024.09.05.00.071.0
131.02.069.01.04.04.026.01.022.01.02.00.019.018.0328.02.0
140.01.01.044.01.00.01.023.022.012.025.0366.01.00.00.03.0
156.06.03.09.03.02.00.08.01.019.00.07.049.0122.039.0226.0
166.043.02.08.011.0106.00.032.02.031.02.07.06.0203.04.037.0
173.013.02.07.019.0210.06.0148.02.04.00.02.05.040.012.027.0
187.03.07.012.082.057.02.0126.03.00.01.016.022.033.054.075.0
1914.017.036.047.036.021.013.023.07.013.017.027.024.070.091.044.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.0230.112-0.4390.4040.4650.578-3.1260.0540.0230.485-1.022-0.5990.140.316-0.599-0.49
02-0.1440.8280.14-0.7210.2930.828-1.3280.695-1.6-0.22-1.328-1.114-1.2150.3830.404-0.788
03-0.04-2.2340.361-1.61.504-1.6-0.1810.2690.679-1.975-0.144-1.6-0.599-2.5840.741-0.599
04-0.658-3.1261.7520.504-1.975-4.4-1.6-1.77-0.49-1.9751.345-0.439-3.126-3.1260.726-2.234
05-0.599-2.584-0.658-1.77-4.4-2.234-4.4-2.2341.5180.8141.0820.741-1.975-0.86-1.3280.56
061.539-3.126-1.215-1.3280.907-3.126-3.126-1.2151.203-1.6-2.234-2.2340.9320.167-2.234-1.215
07-2.2342.476-0.721-0.658-3.1260.293-3.126-3.126-4.4-0.658-4.4-4.4-4.4-0.26-3.126-1.975
08-3.126-4.4-2.584-3.1262.373-0.5430.630.293-1.215-3.126-1.6-3.126-1.975-4.4-0.721-2.584
09-0.0080.4250.5041.95-3.126-1.975-4.4-0.788-2.584-1.114-1.4540.695-2.584-1.975-1.215-0.008
10-0.86-1.215-1.6-1.328-1.022-0.392-1.454-0.144-1.454-0.392-1.3280.0230.140.8280.2931.741
11-4.40.504-0.938-2.234-4.41.004-3.1260.14-3.1260.465-1.328-1.975-2.5841.795-0.860.293
12-3.126-3.126-4.4-3.1260.63-0.181-0.3462.149-1.975-2.234-2.234-0.26-1.215-1.77-4.40.814
13-3.126-2.5840.785-3.126-1.975-1.975-0.181-3.126-0.346-3.126-2.584-4.4-0.49-0.5432.34-2.584
14-4.4-3.126-3.1260.339-3.126-4.4-3.126-0.302-0.346-0.938-0.222.449-3.126-4.4-4.4-2.234
15-1.6-1.6-2.234-1.215-2.234-2.584-4.4-1.328-3.126-0.49-4.4-1.4540.4451.3530.2191.968
16-1.60.316-2.584-1.328-1.0221.213-4.40.023-2.584-0.008-2.584-1.454-1.61.861-1.9750.167
17-2.234-0.86-2.584-1.454-0.491.895-1.61.545-2.584-1.975-4.4-2.584-1.770.244-0.938-0.144
18-1.454-2.234-1.454-0.9380.9570.595-2.5841.385-2.234-4.4-3.126-0.658-0.3460.0540.5420.868
19-0.788-0.5990.140.4040.14-0.392-0.86-0.302-1.454-0.86-0.599-0.144-0.260.81.0610.339