Model info
Transcription factorPGR
ModelPRGR_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
A
Motif rank
0
ConsensusRGvACWYYbTGTdCYb
Best auROC (human)0.970302363763162
Best auROC (mouse)0.9567939418621471
Peak sets in benchmark (human)51
Peak sets in benchmark (mouse)15
Aligned words315
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
HGNC8910
EntrezGene5241
UniProt IDPRGR_HUMAN
UniProt ACP06401
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.96321
0.0005 5.846509999999999
0.0001 7.70396
GTEx tissue expression atlas PGR expression
ReMap ChIP-seq dataset list PGR datasets
Motifs in JASPAR
PCM
ACGT
01133.07.0127.048.0
0231.03.0266.015.0
03157.050.059.049.0
04282.016.08.09.0
053.0276.03.033.0
06203.011.036.065.0
079.057.054.0195.0
0825.069.036.0185.0
0921.0147.046.0101.0
1029.020.013.0253.0
115.027.0271.012.0
1218.011.011.0275.0
1374.041.047.0153.0
1420.0255.03.037.0
1526.083.08.0198.0
1641.077.074.0123.0
PWM
ACGT
010.517-2.2520.471-0.484
02-0.905-2.8941.205-1.585
030.681-0.444-0.283-0.464
041.263-1.526-2.14-2.039
05-2.8941.241-2.894-0.845
060.936-1.864-0.762-0.188
07-2.039-0.316-0.3690.896
08-1.11-0.13-0.7620.844
09-1.2740.616-0.5250.245
10-0.969-1.319-1.7151.155
11-2.522-1.0371.223-1.786
12-1.417-1.864-1.8641.238
13-0.061-0.636-0.5040.655
14-1.3191.163-2.894-0.735
15-1.0720.052-2.140.911
16-0.636-0.022-0.0610.439