Model info
Transcription factorPgr
ModelPRGR_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusRGdACAvAvWGThCY
Best auROC (human)0.961874610137618
Best auROC (mouse)0.9753742776697585
Peak sets in benchmark (human)51
Peak sets in benchmark (mouse)15
Aligned words500
TF familySteroid hormone receptors (NR3){2.1.1}
TF subfamilyGR-like receptors (NR3C){2.1.1.1}
MGI97567
EntrezGene
UniProt IDPRGR_MOUSE
UniProt ACQ00175
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.37916
0.0005 5.40346
0.0001 7.53026
GTEx tissue expression atlas Pgr expression
Motifs in JASPAR
PCM
ACGT
01232.05.0229.034.0
0257.06.0414.023.0
03226.079.0103.092.0
04463.09.019.09.0
051.0479.016.04.0
06397.07.042.054.0
07125.088.0203.084.0
08319.00.0181.00.0
09202.0131.0129.038.0
1089.061.015.0335.0
1117.011.0472.00.0
1225.013.011.0451.0
1399.0111.079.0211.0
1418.0421.08.053.0
1549.0191.015.0245.0
PWM
ACGT
010.613-2.9610.6-1.27
02-0.771-2.8191.189-1.64
030.587-0.452-0.191-0.302
041.3-2.484-1.818-2.484
05-3.9031.334-1.975-3.126
061.147-2.694-1.067-0.823
070.0-0.3460.48-0.392
080.929-4.40.366-4.4
090.4750.0460.031-1.163
10-0.335-0.705-2.0340.978
11-1.92-2.3111.32-4.4
12-1.561-2.163-2.3111.274
13-0.23-0.117-0.4520.519
14-1.8681.206-2.584-0.841
15-0.9180.42-2.0340.667