Model info
Transcription factorPROX1
ModelPROX1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length17
Quality
D
Motif rank
0
ConsensusbdbbRRGRhGKSdKRRd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words773
TF familyHD-PROS factors{3.1.7}
TF subfamilyPROX-1{3.1.7.0.1}
HGNC9459
EntrezGene5629
UniProt IDPROX1_HUMAN
UniProt ACQ92786
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.398059999999999
0.0005 5.16831
0.0001 6.73296
GTEx tissue expression atlas PROX1 expression
ReMap ChIP-seq dataset list PROX1 datasets
Motifs in JASPAR
PCM
ACGT
01115.75124.75333.75198.75
02124.5117.5354.5176.5
03102.0113.0383.0175.0
0461.089.0291.0332.0
05416.024.0200.0133.0
06380.08.0370.015.0
0720.53.5735.513.5
08203.253.25542.2524.25
09140.0429.041.0163.0
1028.02.0696.047.0
1119.063.0360.0331.0
1213.0343.0386.031.0
13119.035.0213.0406.0
1464.057.0229.0423.0
15139.7596.75467.7568.75
16119.563.5478.5111.5
17165.5102.5358.5146.5
PWM
ACGT
01-0.507-0.4330.5430.028
02-0.435-0.4920.603-0.09
03-0.631-0.5310.68-0.098
04-1.135-0.7650.4060.538
050.762-2.0280.034-0.37
060.672-3.0040.645-2.459
07-2.174-3.6311.33-2.554
080.05-3.6811.026-2.018
09-0.3190.793-1.519-0.169
10-1.883-3.9741.275-1.388
11-2.244-1.1030.6180.535
12-2.5870.570.688-1.786
13-0.48-1.6710.0970.738
14-1.088-1.2010.1680.779
15-0.321-0.6830.879-1.018
16-0.475-1.0960.902-0.544
17-0.154-0.6270.614-0.274