Model info
Transcription factorPRRX1
ModelPRRX1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length7
Quality
D
Motif rank
0
ConsensusTAATCTG
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words4
TF familyPaired-related HD factors{3.1.3}
TF subfamilyPRRX{3.1.3.21}
HGNC9142
EntrezGene5396
UniProt IDPRRX1_HUMAN
UniProt ACP54821
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.831005
0.0005 5.12609
0.0001 6.473435
GTEx tissue expression atlas PRRX1 expression
ReMap ChIP-seq dataset list PRRX1 datasets
Motifs in JASPAR
PCM
ACGT
010.00.00.04.0
024.00.00.00.0
034.00.00.00.0
040.01.9460.02.054
050.9733.0270.00.0
060.00.9730.03.027
070.2430.2433.270.243
PWM
ACGT
01-1.357-1.357-1.3571.172
021.172-1.357-1.357-1.357
031.172-1.357-1.357-1.357
04-1.3570.532-1.3570.578
05-0.020.918-1.357-1.357
06-1.357-0.02-1.3570.918
07-0.826-0.8260.988-0.826