Model info
Transcription factorPRRX2
ModelPRRX2_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length7
Quality
C
Motif rank
0
ConsensushTAATTR
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words65
TF familyPaired-related HD factors{3.1.3}
TF subfamilyPRRX{3.1.3.21}
HGNC21338
EntrezGene51450
UniProt IDPRRX2_HUMAN
UniProt ACQ99811
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.31537
0.0005 6.82732
0.0001 7.6565
GTEx tissue expression atlas PRRX2 expression
ReMap ChIP-seq dataset list PRRX2 datasets
Motifs in JASPAR
PCM
ACGT
0110.2518.254.2526.25
020.00.00.059.0
0359.00.00.00.0
0458.00.01.00.0
051.01.00.057.0
060.03.03.053.0
0727.01.029.02.0
PWM
ACGT
01-0.3360.2-1.0960.548
02-2.739-2.739-2.7391.337
031.337-2.739-2.739-2.739
041.32-2.739-2.055-2.739
05-2.055-2.055-2.7391.303
06-2.739-1.367-1.3671.231
070.575-2.0550.644-1.653