Model info
Transcription factorRAX2
ModelRAX2_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length12
Quality
D
Motif rank
0
ConsensushTAATTRRhYhW
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words33721
TF familyPaired-related HD factors{3.1.3}
TF subfamilyRAX{3.1.3.22}
HGNC18286
EntrezGene84839
UniProt IDRAX2_HUMAN
UniProt ACQ96IS3
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.595644999999999
0.0005 6.531195
0.0001 8.35193
GTEx tissue expression atlas RAX2 expression
ReMap ChIP-seq dataset list RAX2 datasets
Motifs in JASPAR
PCM
ACGT
015566.012648.05216.010146.0
021821.752046.751488.7528218.75
0328954.251460.251642.251519.25
0433284.7593.7596.75100.75
052.011.020.033543.0
0615.02073.0314.031174.0
0722926.25890.259757.252.25
0817468.253012.2512761.25334.25
0918831.254010.253413.257321.25
101858.02765.02175.026778.0
119111.04288.03348.016829.0
1223537.03067.03124.03848.0
PWM
ACGT
01-0.4110.41-0.4760.19
02-1.527-1.41-1.7281.212
031.238-1.747-1.63-1.708
041.377-4.468-4.437-4.397
05-7.508-6.425-5.9171.385
06-6.167-1.398-3.2781.312
071.005-2.2410.15-7.455
080.733-1.0240.419-3.216
090.808-0.738-0.899-0.137
10-1.507-1.11-1.351.16
110.082-0.671-0.9190.695
121.031-1.006-0.988-0.78