Model info
Transcription factorREL
ModelREL_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
B
Motif rank
0
ConsensusdvhdGGGRAWKbMSW
Best auROC (human)
Best auROC (mouse)0.9210502853360392
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)11
Aligned words178
TF familyNF-kappaB-related factors{6.1.1}
TF subfamilyNF-kappaB p65 subunit-like factors{6.1.1.2}
HGNC9954
EntrezGene5966
UniProt IDREL_HUMAN
UniProt ACQ04864
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.33526
0.0005 6.20916
0.0001 7.994960000000001
GTEx tissue expression atlas REL expression
ReMap ChIP-seq dataset list REL datasets
Motifs in JASPAR
PCM
ACGT
0155.015.046.062.0
0249.030.086.013.0
0375.025.021.057.0
0486.07.054.031.0
0525.01.0145.07.0
062.00.0175.01.0
0715.00.0161.02.0
08110.03.062.03.0
09163.01.011.03.0
10125.05.017.031.0
1115.024.029.0110.0
122.038.059.079.0
1335.0122.08.013.0
1418.0135.020.05.0
15118.020.018.022.0
PWM
ACGT
010.206-1.0330.0320.324
020.094-0.3810.645-1.164
030.51-0.555-0.720.241
040.645-1.7080.189-0.349
05-0.555-2.9931.161-1.708
06-2.632-3.5651.348-2.993
07-1.033-3.5651.265-2.632
080.888-2.3670.324-2.367
091.277-2.993-1.315-2.367
101.014-1.984-0.918-0.349
11-1.033-0.594-0.4130.888
12-2.632-0.1530.2750.562
13-0.2320.99-1.595-1.164
14-0.8641.091-0.766-1.984
150.957-0.766-0.864-0.676