Model info
Transcription factorRel
ModelREL_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length15
Quality
A
Motif rank
0
ConsensusdvhdGGGRAWKbMSW
Best auROC (human)
Best auROC (mouse)0.9210502853360392
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)11
Aligned words178
TF familyNF-kappaB-related factors{6.1.1}
TF subfamilyNF-kappaB p65 subunit-like factors{6.1.1.2}
MGI97897
EntrezGene
UniProt IDREL_MOUSE
UniProt ACP15307
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.28156
0.0005 6.15161
0.0001 7.93041
GTEx tissue expression atlas Rel expression
Motifs in JASPAR
PCM
ACGT
0155.015.046.062.0
0249.030.086.013.0
0375.025.021.057.0
0486.07.054.031.0
0525.01.0145.07.0
062.00.0175.01.0
0715.00.0161.02.0
08110.03.062.03.0
09163.01.011.03.0
10125.05.017.031.0
1115.024.029.0110.0
122.038.059.079.0
1335.0122.08.013.0
1418.0135.020.05.0
15118.020.018.022.0
PWM
ACGT
010.206-1.0330.0320.324
020.094-0.3810.645-1.164
030.51-0.555-0.720.241
040.645-1.7080.189-0.349
05-0.555-2.9931.161-1.708
06-2.632-3.5651.348-2.993
07-1.033-3.5651.265-2.632
080.888-2.3670.324-2.367
091.277-2.993-1.315-2.367
101.014-1.984-0.918-0.349
11-1.033-0.594-0.4130.888
12-2.632-0.1530.2750.562
13-0.2320.99-1.595-1.164
14-0.8641.091-0.766-1.984
150.957-0.766-0.864-0.676