Model info
Transcription factorRFX3
ModelRFX3_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length14
Quality
B
Motif rank
0
ConsensusbGTTRCCATGGhRn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words772
TF familyRFX-related factors{3.3.3}
TF subfamilyRFX3{3.3.3.0.3}
HGNC9984
EntrezGene5991
UniProt IDRFX3_HUMAN
UniProt ACP48380
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.10071
0.0005 2.60626
0.0001 5.70946
GTEx tissue expression atlas RFX3 expression
ReMap ChIP-seq dataset list RFX3 datasets
Motifs in JASPAR
PCM
ACGT
0173.555198.684229.985152.439
020.00.0654.6630.0
030.00.00.0654.663
0445.8195.850.0602.993
05218.0972.925399.7233.921
060.0583.8540.070.809
070.0517.1490.0137.514
08653.7740.00.4440.444
094.4420.036.092614.128
1068.9650.0585.6980.0
1144.1940.888609.580.0
1278.842182.78547.793345.242
13384.2330.444196.89173.094
14363.64496.17996.17998.66
PWM
ACGT
01-0.7880.1920.337-0.07
02-4.625-4.6251.379-4.625
03-4.625-4.625-4.6251.379
04-1.248-3.097-4.6251.297
050.285-3.5930.887-1.537
06-4.6251.265-4.625-0.825
07-4.6251.144-4.625-0.172
081.378-4.625-4.382-4.382
09-3.305-4.625-1.4781.315
10-0.851-4.6251.268-4.625
11-1.283-4.1881.308-4.625
12-0.720.109-1.2070.741
130.848-4.3820.183-0.794
140.793-0.525-0.525-0.5