Model info
Transcription factorRfx3
ModelRFX3_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusSbGTTGCCWKGGvRAC
Best auROC (human)
Best auROC (mouse)0.9894171641236561
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)2
Aligned words351
TF familyRFX-related factors{3.3.3}
TF subfamilyRFX3{3.3.3.0.3}
MGI106582
EntrezGene19726
UniProt IDRFX3_MOUSE
UniProt ACP48381
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.20751
0.0005 2.52841
0.0001 5.30566
GTEx tissue expression atlas Rfx3 expression
Motifs in JASPAR
PCM
ACGT
019.0203.077.061.0
0216.097.0170.067.0
030.00.0350.00.0
040.013.01.0336.0
056.024.01.0319.0
0616.05.0310.019.0
070.0322.01.027.0
080.0293.00.057.0
09273.09.023.045.0
1044.07.051.0248.0
1120.00.0330.00.0
1233.02.0315.00.0
1379.0147.063.061.0
14177.012.0150.011.0
15294.027.024.05.0
1610.0299.05.036.0
PWM
ACGT
01-2.140.832-0.126-0.354
02-1.6280.1010.656-0.262
03-4.107-4.1071.374-4.107
04-4.107-1.817-3.5861.333
05-2.478-1.251-3.5861.282
06-1.628-2.6221.253-1.47
07-4.1071.291-3.586-1.14
08-4.1071.197-4.107-0.42
091.127-2.14-1.291-0.65
10-0.671-2.352-0.5281.031
11-1.422-4.1071.315-4.107
12-0.948-3.2461.269-4.107
13-0.10.512-0.322-0.354
140.696-1.8880.532-1.965
151.2-1.14-1.251-2.622
16-2.0491.217-2.622-0.865