Model info
Transcription factorRfx3
ModelRFX3_MOUSE.H11MO.1.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
C
Motif rank
1
ConsensusbGTTGCCWKG
Best auROC (human)
Best auROC (mouse)0.997
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)2
Aligned words500
TF familyRFX-related factors {3.3.3}
TF subfamilyRFX3 {3.3.3.0.3}
MGIMGI:106582
EntrezGeneGeneID:19726
(SSTAR profile)
UniProt IDRFX3_MOUSE
UniProt ACP48381
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.64278
0.0005 4.764665000000001
0.0001 7.0678600000000005
GTEx tissue expression atlas Rfx3 expression
Motifs in JASPAR
PCM
ACGT
0138.0153.0200.0109.0
023.04.0492.01.0
030.06.00.0494.0
043.033.00.0464.0
0520.08.0448.024.0
060.0483.00.017.0
070.0375.00.0125.0
08390.024.026.060.0
0976.010.0130.0284.0
1022.02.0475.01.0
PWM
ACGT
01-1.1630.20.465-0.135
02-3.325-3.1261.361-3.903
03-4.4-2.819-4.41.365
04-3.325-1.298-4.41.303
05-1.77-2.5841.268-1.6
06-4.41.343-4.4-1.92
07-4.41.09-4.40.0
081.129-1.6-1.525-0.721
09-0.49-2.3940.0390.814
10-1.681-3.5731.326-3.903