Model info
Transcription factorRFX4
ModelRFX4_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length15
Quality
D
Motif rank
0
ConsensusbGTTGCCATGGhWAY
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words2791
TF familyRFX-related factors{3.3.3}
TF subfamilyRFX4{3.3.3.0.4}
HGNC9985
EntrezGene5992
UniProt IDRFX4_HUMAN
UniProt ACQ33E94
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.69906
0.0005 3.8896100000000002
0.0001 6.37426
GTEx tissue expression atlas RFX4 expression
ReMap ChIP-seq dataset list RFX4 datasets
Motifs in JASPAR
PCM
ACGT
01316.751009.75954.75494.75
0286.2564.252559.2566.25
0312.7530.7521.752710.75
04180.75113.7517.752463.75
05279.522.52336.5137.5
061.02112.028.0635.0
070.02250.02.0524.0
082443.056.0129.0148.0
09140.048.0216.02372.0
10222.024.02528.02.0
11266.592.52382.534.5
12434.5792.5114.51434.5
131327.2560.25437.25951.25
142365.25193.2599.25118.25
15258.01846.0235.0437.0
PWM
ACGT
01-0.7810.3740.318-0.337
02-2.065-2.3521.303-2.322
03-3.855-3.057-3.3781.36
04-1.337-1.794-3.5631.265
05-0.905-3.3471.212-1.607
06-5.4531.111-3.145-0.089
07-5.8611.174-5.163-0.28
081.256-2.485-1.67-1.535
09-1.59-2.634-1.1611.227
10-1.134-3.2881.291-5.163
11-0.953-1.9971.231-2.948
12-0.4670.132-1.7880.725
130.647-2.414-0.460.315
141.224-1.271-1.928-1.756
15-0.9850.977-1.077-0.461