Model info
Transcription factorRFX5
ModelRFX5_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv10
Model length23
Quality
A
Motif rank
0
ConsensusnvnvbSvbYdGTYRCYRRGbvvv
Best auROC (human)0.9867606457727572
Best auROC (mouse)
Peak sets in benchmark (human)14
Peak sets in benchmark (mouse)
Aligned words500
TF familyRFX-related factors{3.3.3}
TF subfamilyRFX5{3.3.3.0.5}
HGNC9986
EntrezGene5993
UniProt IDRFX5_HUMAN
UniProt ACP48382
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.54091
0.0005 8.502310000000001
0.0001 12.656860000000002
GTEx tissue expression atlas RFX5 expression
ReMap ChIP-seq dataset list RFX5 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0118.41415.66146.89211.61921.94417.29735.79433.51960.18529.21245.29819.3312.00524.53490.917.395
0213.42359.93819.05320.13518.92326.14916.45225.1874.00768.69443.90632.27711.86728.38720.69720.912
0311.17445.86650.50710.67353.19622.72691.62715.61915.58339.64439.835.055.83513.16171.3558.154
042.02410.36122.75150.65217.85922.28944.30436.94613.34825.05641.003173.9131.9328.63714.81214.115
055.58216.7669.9852.82913.81423.74115.55113.23619.28243.25428.47931.85517.777227.80721.6068.436
0618.613.19723.74410.904221.433.26330.18926.7158.79431.32319.98615.5193.49828.54515.5368.776
077.1691.39457.00196.74726.31426.52125.24318.258.03132.59437.07311.7575.6617.29530.7568.205
083.87732.0654.6156.60818.99783.16622.58243.05810.466101.3620.87817.373.4982.54221.92327.004
097.3065.52612.86211.13685.87523.98232.019157.25824.1239.85516.49419.52619.5741.6934.02838.748
104.6910.0132.1860.02.3430.77737.9320.00.01.3593.270.7827.0920.756217.4061.413
110.00.00.96813.1580.00.7770.02.1061.89324.67820.205434.0190.00.00.02.195
120.00.7721.1210.00.01.6465.91517.8938.7160.8581.739.8742.65870.817.484330.525
1310.6093.37224.5412.85330.820.77418.81923.6740.00.012.5483.70346.3514.319278.76918.851
140.086.7920.9880.01.98315.4061.0760.05.191294.29118.47916.7160.89855.5821.6360.964
150.04.5441.7241.8037.747212.1138.216223.9941.74813.882.1654.3851.4989.7870.06.394
163.7770.7674.7191.729191.314.46233.06711.4867.2410.04.8650.0131.9894.61595.9364.037
1758.08118.826182.06475.3467.0442.0180.7820.019.6013.878108.6016.5073.3242.6249.2642.04
180.8863.79877.6555.7128.9866.0568.7673.5373.47312.932279.3274.9796.2731.99573.5432.081
193.5395.6035.9974.486.223.0253.50512.03254.976179.187146.85858.272.37112.1330.9350.87
2024.70212.12125.5664.717122.28516.83940.73720.08757.75742.56634.50522.46629.349.97432.2724.066
2155.3948.888165.5684.23532.45317.97515.83315.23943.12523.71551.90914.3315.12210.50327.6188.092
2271.55418.22434.03512.28212.31816.08415.34617.334130.07845.49567.21718.1387.6169.07512.04313.163
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.52-0.6790.402-0.969-0.348-0.5820.1340.0690.649-0.0670.367-0.473-0.937-0.2391.06-0.576
02-0.8290.645-0.487-0.433-0.494-0.176-0.631-0.2130.8550.7810.3360.032-0.948-0.095-0.406-0.396
03-1.0070.380.475-1.0510.527-0.3141.068-0.681-0.6840.2350.24-1.761-1.626-0.8480.819-1.309
04-2.574-1.079-0.3130.478-0.55-0.3330.3450.166-0.834-0.2180.2691.706-2.613-1.254-0.733-0.78
05-1.668-0.612-1.115-2.286-0.801-0.271-0.686-0.842-0.4750.322-0.0920.019-0.5551.976-0.364-1.277
06-0.51-2.178-0.271-1.031.9470.062-0.034-0.155-1.2370.002-0.44-0.688-2.097-0.089-0.687-1.239
07-1.4331.0650.5951.122-0.17-0.162-0.211-0.529-1.3240.0420.169-0.957-1.655-0.582-0.016-1.303
08-2.0040.025-1.844-1.509-0.490.971-0.320.317-1.071.168-0.397-0.578-2.0990.964-0.349-0.144
09-1.414-1.677-0.87-1.011.003-0.2610.0241.606-0.255-1.128-0.628-0.463-0.461-2.7230.0840.213
10-1.829-4.41.433-4.4-2.45-3.3010.192-4.4-4.4-2.9011.085-3.297-1.442-3.3191.929-2.866
11-4.4-4.4-3.149-0.848-4.4-3.301-4.4-2.54-2.63-0.233-0.4292.62-4.4-4.4-4.4-2.505
12-4.4-3.305-3.043-4.4-4.4-2.744-1.613-0.548-1.246-3.234-2.704-1.1260.3080.811-1.3912.347
13-1.057-2.13-0.238-0.871-0.014-3.304-0.499-0.274-4.4-4.4-0.894-2.0460.39-0.7662.177-0.497
14-4.41.014-3.135-4.4-2.591-0.695-3.073-4.4-1.7352.232-0.517-0.615-3.2020.57-2.749-3.153
15-4.4-1.858-2.706-2.67-1.3581.905-1.3021.959-2.695-0.796-2.517-1.891-2.82-1.134-4.4-1.54
16-2.028-3.31-1.824-2.7041.802-1.8750.056-0.98-1.422-4.4-1.796-4.41.431-1.8441.113-1.967
170.614-0.4991.7520.873-1.448-2.576-3.297-4.4-0.459-2.0041.237-1.523-2.143-2.352-1.187-2.567
18-3.212-2.0220.903-1.646-1.216-1.591-1.24-2.087-2.103-0.8652.179-1.774-1.558-2.5860.849-2.55
19-2.086-1.664-1.6-1.872-1.566-2.227-2.095-0.9350.561.7361.5380.617-2.439-0.927-3.174-3.225
20-0.232-0.928-0.198-1.8241.355-0.6080.262-0.4350.6090.3060.098-0.325-0.062-1.1160.032-1.961
210.567-1.2271.657-1.9230.037-0.544-0.668-0.7050.319-0.2720.503-0.765-1.748-1.066-0.122-1.317
220.821-0.5310.084-0.915-0.912-0.653-0.699-0.581.4170.3720.759-0.535-1.374-1.207-0.934-0.848