Model info
Transcription factorRfx6
ModelRFX6_MOUSE.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusbbGYWKCYvdGnnvvn
Best auROC (human)
Best auROC (mouse)0.954178287745621
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words522
TF familyRFX-related factors{3.3.3}
TF subfamilyRFX6 (RFXDC-1){3.3.3.0.6}
MGI2445208
EntrezGene320995
UniProt IDRFX6_MOUSE
UniProt ACQ8C7R7
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 9.52481
0.0005 11.26266
0.0001 14.571760000000001
GTEx tissue expression atlas Rfx6 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
018.06.020.019.023.021.024.097.06.018.050.034.07.05.047.017.0
021.00.041.02.04.01.044.01.04.00.0136.01.03.00.0163.01.0
030.01.04.07.00.00.00.01.023.049.032.0280.00.03.00.02.0
043.02.02.016.010.01.02.040.011.07.01.017.045.042.016.0187.0
0510.01.037.021.06.00.09.037.00.01.010.010.019.01.0190.050.0
060.035.00.00.00.03.00.00.02.0231.04.09.00.0114.01.03.0
070.00.01.01.01.0228.00.0154.00.03.01.01.00.06.01.05.0
080.00.00.01.0102.054.020.061.03.00.00.00.060.023.067.011.0
0933.01.077.054.021.07.018.031.010.01.064.012.027.04.035.07.0
101.00.089.01.00.00.012.01.03.03.0187.01.05.00.099.00.0
110.00.08.01.00.01.01.01.077.076.0146.088.00.01.02.00.0
124.019.042.012.030.011.010.027.050.043.033.031.020.09.033.028.0
1337.017.040.010.054.014.07.07.055.038.011.014.025.022.039.012.0
1447.080.029.015.024.044.06.017.025.054.014.04.01.020.012.010.0
1511.046.028.012.043.059.017.079.06.028.016.011.07.015.017.07.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.113-1.386-0.224-0.275-0.087-0.176-0.0451.34-1.386-0.3280.6810.299-1.241-1.5570.619-0.384
02-2.92-4.220.484-2.374-1.763-2.920.554-2.92-1.763-4.221.677-2.92-2.022-4.221.857-2.92
03-4.22-2.92-1.763-1.241-4.22-4.22-4.22-2.92-0.0870.6610.2392.397-4.22-2.022-4.22-2.374
04-2.022-2.374-2.374-0.443-0.899-2.92-2.3740.46-0.807-1.241-2.92-0.3840.5760.508-0.4431.994
05-0.899-2.920.382-0.176-1.386-4.22-1.0010.382-4.22-2.92-0.899-0.899-0.275-2.922.010.681
06-4.220.327-4.22-4.22-4.22-2.022-4.22-4.22-2.3742.205-1.763-1.001-4.221.501-2.92-2.022
07-4.22-4.22-2.92-2.92-2.922.192-4.221.801-4.22-2.022-2.92-2.92-4.22-1.386-2.92-1.557
08-4.22-4.22-4.22-2.921.390.757-0.2240.878-2.022-4.22-4.22-4.220.862-0.0870.972-0.807
090.269-2.921.110.757-0.176-1.241-0.3280.207-0.899-2.920.926-0.7230.071-1.7630.327-1.241
10-2.92-4.221.254-2.92-4.22-4.22-0.723-2.92-2.022-2.0221.994-2.92-1.557-4.221.36-4.22
11-4.22-4.22-1.113-2.92-4.22-2.92-2.92-2.921.111.0971.7481.243-4.22-2.92-2.374-4.22
12-1.763-0.2750.508-0.7230.175-0.807-0.8990.0710.6810.5310.2690.207-0.224-1.0010.2690.107
130.382-0.3840.46-0.8990.757-0.573-1.241-1.2410.7750.409-0.807-0.573-0.005-0.1310.434-0.723
140.6191.1480.141-0.506-0.0450.554-1.386-0.384-0.0050.757-0.573-1.763-2.92-0.224-0.723-0.899
15-0.8070.5980.107-0.7230.5310.845-0.3841.136-1.3860.107-0.443-0.807-1.241-0.506-0.384-1.241