Model info
Transcription factorRfx6
ModelRFX6_MOUSE.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
C
Motif rank
0
ConsensusbdGYWKCYnKG
Best auROC (human)
Best auROC (mouse)0.998
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words501
TF familyRFX-related factors {3.3.3}
TF subfamilyRFX6 (RFXDC-1) {3.3.3.0.6}
MGIMGI:2445208
EntrezGeneGeneID:320995
(SSTAR profile)
UniProt IDRFX6_MOUSE
UniProt ACQ8C7R7
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.99564
0.0005 5.729445
0.0001 7.186920000000001
GTEx tissue expression atlas Rfx6 expression
Motifs in JASPAR
PCM
ACGT
0154.0229.0120.097.0
0266.059.0170.0205.0
0320.016.0454.010.0
0417.086.061.0336.0
0574.073.029.0324.0
0637.013.0315.0135.0
076.0467.09.018.0
084.0291.03.0202.0
09187.0105.0109.099.0
10119.05.0236.0140.0
1128.04.0465.03.0
PWM
ACGT
01-0.8230.6-0.04-0.25
02-0.628-0.7370.3040.49
03-1.77-1.9751.281-2.394
04-1.92-0.368-0.7050.981
05-0.516-0.529-1.4210.945
06-1.189-2.1630.9170.076
07-2.8191.309-2.484-1.868
08-3.1260.838-3.3250.475
090.399-0.172-0.135-0.23
10-0.049-2.9610.630.112
11-1.454-3.1261.305-3.325