Model info
Transcription factorRfx6
ModelRFX6_MOUSE.H11MO.1.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length14
Quality
C
Motif rank
1
ConsensusdGYTGCYdKGvdvv
Best auROC (human)
Best auROC (mouse)0.9793125403809352
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)3
Aligned words502
TF familyRFX-related factors{3.3.3}
TF subfamilyRFX6 (RFXDC-1){3.3.3.0.6}
MGI2445208
EntrezGene320995
UniProt IDRFX6_MOUSE
UniProt ACQ8C7R7
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.558909999999999
0.0005 5.52241
0.0001 7.48181
GTEx tissue expression atlas Rfx6 expression
Motifs in JASPAR
PCM
ACGT
0173.045.0208.0174.0
0213.06.0478.03.0
0323.0103.024.0350.0
0430.07.012.0451.0
0535.017.0406.042.0
062.0481.08.09.0
074.0238.00.0258.0
08263.033.0140.064.0
0972.00.0308.0120.0
105.03.0491.01.0
11179.082.0162.077.0
12171.061.0141.0127.0
13286.058.099.057.0
14111.0280.061.048.0
PWM
ACGT
01-0.529-1.00.5040.327
02-2.163-2.8191.332-3.325
03-1.64-0.191-1.61.022
04-1.389-2.694-2.2341.274
05-1.242-1.921.17-1.067
06-3.5731.338-2.584-2.484
07-3.1260.638-4.40.718
080.737-1.2980.112-0.658
09-0.543-4.40.894-0.04
10-2.961-3.3251.359-3.903
110.355-0.4150.256-0.477
120.31-0.7050.1190.016
130.821-0.754-0.23-0.771
14-0.1170.8-0.705-0.938