Model info
Transcription factorRREB1
ModelRREB1_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceIntegrative
Model releaseHOCOMOCOv9
Model length22
Quality
D
Motif rank
0
ConsensusdbSKbdGKKGKTGbTKKGKGGd
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words26
TF familyFactors with multiple dispersed zinc fingers{2.3.4}
TF subfamilyunclassified{2.3.4.0}
HGNC10449
EntrezGene6239
UniProt IDRREB1_HUMAN
UniProt ACQ92766
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.71601
0.0005 4.74231
0.0001 6.910260000000001
GTEx tissue expression atlas RREB1 expression
ReMap ChIP-seq dataset list RREB1 datasets
Motifs in JASPAR
PCM
ACGT
016.8233.08910.1045.985
022.0594.11810.7499.074
030.07.01516.0892.896
042.0590.014.8679.074
052.0592.89611.979.074
064.1180.83711.1339.911
070.00.83720.2074.956
080.03.73413.1929.074
090.00.83717.3117.852
100.00.83723.1042.059
110.02.51215.2518.237
120.00.01.67524.325
130.8370.024.3250.837
142.0592.51212.3559.074
150.00.8376.17718.985
161.6750.8374.11819.37
170.00.8378.23716.926
180.01.67524.3250.0
191.6750.017.3117.015
200.00.83722.2662.896
210.00.017.3118.689
223.9263.5425.14813.384
PWM
ACGT
010.043-0.6280.401-0.073
02-0.934-0.3940.4580.302
03-2.1950.0680.838-0.679
04-0.934-2.1950.7630.302
05-0.934-0.6790.5580.302
06-0.394-1.4880.4910.383
07-2.195-1.4881.056-0.237
08-2.195-0.4750.650.302
09-2.195-1.4880.9070.17
10-2.195-1.4881.185-0.934
11-2.195-0.7880.7870.213
12-2.195-2.195-1.0781.235
13-1.488-2.1951.235-1.488
14-0.934-0.7880.5880.302
15-2.195-1.488-0.0450.996
16-1.078-1.488-0.3941.015
17-2.195-1.4880.2130.886
18-2.195-1.0781.235-2.195
19-1.078-2.1950.9070.068
20-2.195-1.4881.149-0.679
21-2.195-2.1950.9070.262
22-0.434-0.518-0.2040.663