Model info
Transcription factorRUNX2
ModelRUNX2_HUMAN.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length17
Quality
A
Motif rank
0
ConsensusndddbbdbTGTGGTYWn
Best auROC (human)0.9711048775645911
Best auROC (mouse)0.9022647694351184
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)25
Aligned words559
TF familyRunt-related factors{6.4.1}
TF subfamilyRunx2 (PEBP2alphaA, CBF-alpha1){6.4.1.0.1}
HGNC10472
EntrezGene860
UniProt IDRUNX2_HUMAN
UniProt ACQ13950
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.91491
0.0005 11.10941
0.0001 15.51956
GTEx tissue expression atlas RUNX2 expression
ReMap ChIP-seq dataset list RUNX2 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0111.08.026.037.023.018.06.035.020.011.019.0110.024.017.059.068.0
0213.010.033.022.022.07.08.017.010.010.042.048.015.027.0146.062.0
0314.07.024.015.014.010.08.022.024.023.0117.065.017.013.072.047.0
042.09.040.018.07.016.07.023.027.017.087.090.010.06.084.049.0
058.010.015.013.018.015.010.05.026.035.0100.057.017.030.098.035.0
0613.013.07.036.021.014.02.053.032.029.054.0108.012.013.013.072.0
077.035.015.021.010.033.06.020.08.031.01.036.07.090.065.0107.0
081.03.04.024.00.04.05.0180.02.02.01.082.01.04.016.0163.0
090.00.04.00.00.00.013.00.00.00.025.01.02.08.0412.027.0
100.00.00.02.00.00.01.07.07.015.03.0429.00.00.00.028.0
110.00.07.00.00.00.015.00.00.00.04.00.00.01.0464.01.0
120.00.00.00.00.00.01.00.01.00.0488.01.00.00.01.00.0
130.01.00.00.00.00.00.00.07.044.048.0391.00.00.00.01.0
142.01.02.02.05.07.00.033.04.010.01.033.019.039.041.0293.0
1513.00.05.012.017.03.06.031.010.01.010.023.068.08.059.0226.0
1628.016.038.026.05.03.01.03.030.07.026.017.047.040.0104.0101.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.006-1.312-0.1660.183-0.286-0.527-1.5840.128-0.423-1.006-0.4741.266-0.244-0.5830.6460.787
02-0.844-1.0980.07-0.33-0.33-1.439-1.312-0.583-1.098-1.0980.3080.441-0.705-0.1281.5480.695
03-0.772-1.439-0.244-0.705-0.772-1.098-1.312-0.33-0.244-0.2861.3270.742-0.583-0.8440.8440.42
04-2.568-1.1990.26-0.527-1.439-0.642-1.439-0.286-0.128-0.5831.0321.066-1.098-1.5840.9970.461
05-1.312-1.098-0.705-0.844-0.527-0.705-1.098-1.754-0.1660.1281.1710.611-0.583-0.0241.1510.128
06-0.844-0.844-1.4390.156-0.376-0.772-2.5680.5390.039-0.0580.5581.247-0.922-0.844-0.8440.844
07-1.4390.128-0.705-0.376-1.0980.07-1.584-0.423-1.3120.008-3.1110.156-1.4391.0660.7421.238
08-3.111-2.218-1.96-0.244-4.387-1.96-1.7541.757-2.568-2.568-3.1110.973-3.111-1.96-0.6421.658
09-4.387-4.387-1.96-4.387-4.387-4.387-0.844-4.387-4.387-4.387-0.204-3.111-2.568-1.3122.584-0.128
10-4.387-4.387-4.387-2.568-4.387-4.387-3.111-1.439-1.439-0.705-2.2182.624-4.387-4.387-4.387-0.092
11-4.387-4.387-1.439-4.387-4.387-4.387-0.705-4.387-4.387-4.387-1.96-4.387-4.387-3.1112.702-3.111
12-4.387-4.387-4.387-4.387-4.387-4.387-3.111-4.387-3.111-4.3872.753-3.111-4.387-4.387-3.111-4.387
13-4.387-3.111-4.387-4.387-4.387-4.387-4.387-4.387-1.4390.3550.4412.531-4.387-4.387-4.387-3.111
14-2.568-3.111-2.568-2.568-1.754-1.439-4.3870.07-1.96-1.098-3.1110.07-0.4740.2350.2852.243
15-0.844-4.387-1.754-0.922-0.583-2.218-1.5840.008-1.098-3.111-1.098-0.2860.787-1.3120.6461.984
16-0.092-0.6420.209-0.166-1.754-2.218-3.111-2.218-0.024-1.439-0.166-0.5830.420.261.211.181