Model info
Transcription factorRunx2
ModelRUNX2_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
A
Motif rank
0
ConsensusnbYTGTGGTYdbn
Best auROC (human)0.8558577691141758
Best auROC (mouse)0.9368392995288972
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)25
Aligned words547
TF familyRunt-related factors{6.4.1}
TF subfamilyRunx2 (PEBP2alphaA, CBF-alpha1){6.4.1.0.1}
MGI99829
EntrezGene12393
UniProt IDRUNX2_MOUSE
UniProt ACQ08775
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.51956
0.0005 9.99022
0.0001 15.482265000000002
GTEx tissue expression atlas Runx2 expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
015.017.026.018.024.027.011.064.019.058.051.044.013.047.021.054.0
025.034.09.013.013.077.06.053.010.069.08.022.04.0100.018.058.0
032.00.00.030.02.03.01.0274.00.02.00.039.03.06.03.0134.0
040.00.07.00.00.00.011.00.01.00.03.00.03.03.0471.00.0
050.00.01.03.01.01.00.01.04.067.04.0417.00.00.00.00.0
060.00.05.00.00.00.067.01.00.00.05.00.00.00.0419.02.0
070.00.00.00.00.00.00.00.01.00.0495.00.00.00.03.00.0
080.00.00.01.00.00.00.00.00.039.06.0453.00.00.00.00.0
090.00.00.00.00.03.01.035.00.01.00.05.013.0113.027.0301.0
106.01.01.05.057.010.07.043.04.03.09.012.070.014.046.0211.0
1118.022.080.017.08.07.07.06.013.016.022.012.016.078.0111.066.0
1220.014.019.02.023.042.011.047.043.045.091.041.014.026.035.026.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-1.768-0.597-0.179-0.541-0.258-0.142-1.020.713-0.4880.6150.4870.341-0.8580.406-0.390.544
02-1.7680.085-1.213-0.858-0.8580.896-1.5980.525-1.1120.787-1.326-0.344-1.9731.157-0.5410.615
03-2.582-4.398-4.398-0.038-2.582-2.232-3.1242.162-4.398-2.582-4.3980.221-2.232-1.598-2.2321.448
04-4.398-4.398-1.452-4.398-4.398-4.398-1.02-4.398-3.124-4.398-2.232-4.398-2.232-2.2322.703-4.398
05-4.398-4.398-3.124-2.232-3.124-3.124-4.398-3.124-1.9730.758-1.9732.582-4.398-4.398-4.398-4.398
06-4.398-4.398-1.768-4.398-4.398-4.3980.758-3.124-4.398-4.398-1.768-4.398-4.398-4.3982.586-2.582
07-4.398-4.398-4.398-4.398-4.398-4.398-4.398-4.398-3.124-4.3982.753-4.398-4.398-4.398-2.232-4.398
08-4.398-4.398-4.398-3.124-4.398-4.398-4.398-4.398-4.3980.221-1.5982.664-4.398-4.398-4.398-4.398
09-4.398-4.398-4.398-4.398-4.398-2.232-3.1240.114-4.398-3.124-4.398-1.768-0.8581.278-0.1422.256
10-1.598-3.124-3.124-1.7680.597-1.112-1.4520.318-1.973-2.232-1.213-0.9360.802-0.7860.3851.901
11-0.541-0.3440.934-0.597-1.326-1.452-1.452-1.598-0.858-0.656-0.344-0.936-0.6560.9091.2610.743
12-0.437-0.786-0.488-2.582-0.30.294-1.020.4060.3180.3631.0630.271-0.786-0.1790.114-0.179