Model info
Transcription factorRUNX3
ModelRUNX3_HUMAN.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusbhTGTGGTYd
Best auROC (human)0.9967899978855514
Best auROC (mouse)0.966451150305558
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)27
Aligned words500
TF familyRunt-related factors{6.4.1}
TF subfamilyRunx3 (PEBP2alphaC, CBF-alpha3, AML-2){6.4.1.0.3}
HGNC10473
EntrezGene864
UniProt IDRUNX3_HUMAN
UniProt ACQ13761
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.52173
0.0005 5.540455
0.0001 7.71481
GTEx tissue expression atlas RUNX3 expression
ReMap ChIP-seq dataset list RUNX3 datasets
Motifs in JASPAR
PCM
ACGT
0167.0106.0144.0183.0
0264.0196.033.0207.0
0318.07.012.0463.0
042.02.0493.03.0
0524.086.04.0386.0
061.00.0498.01.0
070.02.0497.01.0
080.027.018.0455.0
099.094.034.0363.0
10140.018.087.0255.0
PWM
ACGT
01-0.613-0.1630.140.377
02-0.6580.445-1.2980.5
03-1.868-2.694-2.2341.3
04-3.573-3.5731.363-3.325
05-1.6-0.368-3.1261.119
06-3.903-4.41.373-3.903
07-4.4-3.5731.371-3.903
08-4.4-1.489-1.8681.283
09-2.484-0.281-1.271.058
100.112-1.868-0.3570.707