Model info
Transcription factorRxrg
ModelRXRG_MOUSE.H11DI.0.A
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length25
Quality
A
Motif rank
0
ConsensusdvddvdbnnnRRGKKSARGGYYRnv
Best auROC (human)
Best auROC (mouse)0.9856538835971903
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)7
Aligned words395
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyRetinoid X receptors (NR2B){2.1.3.1}
MGI98216
EntrezGene20183
UniProt IDRXRG_MOUSE
UniProt ACP28705
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 8.58811
0.0005 10.40251
0.0001 14.31371
GTEx tissue expression atlas Rxrg expression
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0113.013.048.09.013.014.06.018.037.030.0107.019.010.09.032.010.0
0230.09.029.05.031.07.04.024.077.014.071.031.05.05.036.010.0
0344.012.071.016.014.04.02.015.038.09.063.030.016.023.016.015.0
0411.014.077.010.019.09.09.011.033.011.088.020.010.029.025.012.0
0527.011.023.012.033.010.08.012.065.015.090.029.06.010.028.09.0
0617.030.036.048.011.011.00.024.013.026.050.060.05.027.014.016.0
079.05.020.012.030.023.07.034.029.023.025.023.021.074.037.016.0
0817.015.045.012.073.033.09.010.019.012.037.021.05.037.030.013.0
0921.012.067.014.044.012.06.035.054.012.021.034.06.023.016.011.0
1036.04.073.012.045.04.06.04.038.04.065.03.016.07.064.07.0
1198.02.029.06.012.02.03.02.0130.05.069.04.08.01.011.06.0
129.012.0222.05.06.01.02.01.011.018.082.01.02.01.013.02.0
132.08.014.04.017.02.05.08.08.015.0137.0159.00.03.04.02.0
141.05.019.02.02.01.03.022.03.011.024.0122.03.00.014.0156.0
151.05.03.00.02.013.01.01.07.021.024.08.014.0251.028.09.0
1614.02.05.03.0269.04.06.011.036.05.08.07.07.05.04.02.0
17238.020.051.017.015.00.00.01.019.02.01.01.010.04.06.03.0
1817.03.0259.03.07.00.014.05.07.06.041.04.05.05.08.04.0
190.05.028.03.00.08.04.02.014.09.0290.09.00.04.010.02.0
200.04.03.07.04.02.00.020.037.068.029.0198.01.02.07.06.0
211.023.015.03.04.056.01.015.05.021.010.03.05.0176.022.028.0
226.00.03.06.0234.020.010.012.018.05.019.06.023.01.019.06.0
2335.037.0153.056.08.02.04.012.05.03.030.013.02.08.017.03.0
2411.012.024.03.010.029.00.011.034.068.081.021.04.040.023.017.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.61-0.610.675-0.966-0.61-0.538-1.352-0.2930.4170.211.473-0.24-0.864-0.9660.274-0.864
020.21-0.9660.176-1.5220.242-1.206-1.728-0.011.145-0.5381.0640.242-1.522-1.5220.39-0.864
030.589-0.6881.064-0.408-0.538-1.728-2.34-0.4710.444-0.9660.9450.21-0.408-0.052-0.408-0.471
04-0.772-0.5381.145-0.864-0.24-0.966-0.966-0.7720.304-0.7721.278-0.189-0.8640.1760.03-0.688
050.106-0.772-0.052-0.6880.304-0.864-1.079-0.6880.976-0.4711.30.176-1.352-0.8640.142-0.966
06-0.3490.210.390.675-0.772-0.772-4.191-0.01-0.610.0690.7160.897-1.5220.106-0.538-0.408
07-0.966-1.522-0.189-0.6880.21-0.052-1.2060.3340.176-0.0520.03-0.052-0.1421.1050.417-0.408
08-0.349-0.4710.611-0.6881.0920.304-0.966-0.864-0.24-0.6880.417-0.142-1.5220.4170.21-0.61
09-0.142-0.6881.007-0.5380.589-0.688-1.3520.3620.792-0.688-0.1420.334-1.352-0.052-0.408-0.772
100.39-1.7281.092-0.6880.611-1.728-1.352-1.7280.444-1.7280.976-1.988-0.408-1.2060.961-1.206
111.385-2.340.176-1.352-0.688-2.34-1.988-2.341.667-1.5221.036-1.728-1.079-2.887-0.772-1.352
12-0.966-0.6882.201-1.522-1.352-2.887-2.34-2.887-0.772-0.2931.208-2.887-2.34-2.887-0.61-2.34
13-2.34-1.079-0.538-1.728-0.349-2.34-1.522-1.079-1.079-0.4711.7191.868-4.191-1.988-1.728-2.34
14-2.887-1.522-0.24-2.34-2.34-2.887-1.988-0.096-1.988-0.772-0.011.603-1.988-4.191-0.5381.849
15-2.887-1.522-1.988-4.191-2.34-0.61-2.887-2.887-1.206-0.142-0.01-1.079-0.5382.3230.142-0.966
16-0.538-2.34-1.522-1.9882.392-1.728-1.352-0.7720.39-1.522-1.079-1.206-1.206-1.522-1.728-2.34
172.27-0.1890.735-0.349-0.471-4.191-4.191-2.887-0.24-2.34-2.887-2.887-0.864-1.728-1.352-1.988
18-0.349-1.9882.355-1.988-1.206-4.191-0.538-1.522-1.206-1.3520.519-1.728-1.522-1.522-1.079-1.728
19-4.191-1.5220.142-1.988-4.191-1.079-1.728-2.34-0.538-0.9662.468-0.966-4.191-1.728-0.864-2.34
20-4.191-1.728-1.988-1.206-1.728-2.34-4.191-0.1890.4171.0210.1762.086-2.887-2.34-1.206-1.352
21-2.887-0.052-0.471-1.988-1.7280.828-2.887-0.471-1.522-0.142-0.864-1.988-1.5221.969-0.0960.142
22-1.352-4.191-1.988-1.3522.253-0.189-0.864-0.688-0.293-1.522-0.24-1.352-0.052-2.887-0.24-1.352
230.3620.4171.8290.828-1.079-2.34-1.728-0.688-1.522-1.9880.21-0.61-2.34-1.079-0.349-1.988
24-0.772-0.688-0.01-1.988-0.8640.176-4.191-0.7720.3341.0211.195-0.142-1.7280.494-0.052-0.349