Model info
Transcription factorRAX
ModelRX_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensushTAATTRvYhn
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words340
TF familyPaired-related HD factors{3.1.3}
TF subfamilyRAX{3.1.3.22}
HGNC18662
EntrezGene30062
UniProt IDRX_HUMAN
UniProt ACQ9Y2V3
Comment
Downloads pcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.19691
0.0005 6.35069
0.0001 8.57784
GTEx tissue expression atlas RAX expression
ReMap ChIP-seq dataset list RAX datasets
Motifs in JASPAR
PCM
ACGT
0157.571.532.5173.5
0212.50.54.5317.5
03332.251.251.250.25
04333.250.251.250.25
050.01.00.0334.0
060.01.00.0334.0
07185.00.0144.06.0
08124.551.5147.511.5
0917.0162.014.0142.0
10142.2570.2522.25100.25
11161.2550.2550.2573.25
PWM
ACGT
01-0.368-0.155-0.920.719
02-1.809-3.775-2.6611.32
031.365-3.45-3.45-3.912
041.368-3.912-3.45-3.912
05-4.071-3.548-4.0711.37
06-4.071-3.548-4.0711.37
070.783-4.0710.535-2.436
080.391-0.4760.559-1.884
09-1.530.651-1.7070.521
100.523-0.173-1.2790.177
110.647-0.5-0.5-0.132