Model info
Transcription factorSALL4
ModelSALL4_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
B
Motif rank
0
ConsensusdvdGGGWGKG
Best auROC (human)0.723890186868795
Best auROC (mouse)0.9238028020224335
Peak sets in benchmark (human)1
Peak sets in benchmark (mouse)21
Aligned words500
TF familyFactors with multiple dispersed zinc fingers{2.3.4}
TF subfamilySal-like factors{2.3.4.3}
HGNC15924
EntrezGene57167
UniProt IDSALL4_HUMAN
UniProt ACQ9UJQ4
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.790465
0.0005 5.73309
0.0001 7.470335
GTEx tissue expression atlas SALL4 expression
ReMap ChIP-seq dataset list SALL4 datasets
Motifs in JASPAR
PCM
ACGT
0190.069.0257.084.0
0267.0129.0239.065.0
03180.03.0172.0145.0
046.01.0486.07.0
051.02.0491.06.0
0610.081.0402.07.0
07187.015.05.0293.0
083.01.0494.02.0
0949.08.0330.0113.0
1059.012.0407.022.0
PWM
ACGT
01-0.324-0.5840.714-0.392
02-0.6130.0310.642-0.643
030.361-3.3250.3160.147
04-2.819-3.9031.349-2.694
05-3.903-3.5731.359-2.819
06-2.394-0.4271.16-2.694
070.399-2.034-2.9610.845
08-3.325-3.9031.365-3.573
09-0.918-2.5840.963-0.1
10-0.737-2.2341.172-1.681