Model info
Transcription factorSall4
ModelSALL4_MOUSE.H11MO.0.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length10
Quality
A
Motif rank
0
ConsensusdvdGGGWGKG
Best auROC (human)0.723890186868795
Best auROC (mouse)0.9238028020224335
Peak sets in benchmark (human)1
Peak sets in benchmark (mouse)21
Aligned words500
TF familyFactors with multiple dispersed zinc fingers{2.3.4}
TF subfamilySal-like factors{2.3.4.3}
MGI2139360
EntrezGene99377
UniProt IDSALL4_MOUSE
UniProt ACQ8BX22
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.9162
0.0005 5.836175
0.0001 7.556205
GTEx tissue expression atlas Sall4 expression
Motifs in JASPAR
PCM
ACGT
0190.069.0257.084.0
0267.0129.0239.065.0
03180.03.0172.0145.0
046.01.0486.07.0
051.02.0491.06.0
0610.081.0402.07.0
07187.015.05.0293.0
083.01.0494.02.0
0949.08.0330.0113.0
1059.012.0407.022.0
PWM
ACGT
01-0.324-0.5840.714-0.392
02-0.6130.0310.642-0.643
030.361-3.3250.3160.147
04-2.819-3.9031.349-2.694
05-3.903-3.5731.359-2.819
06-2.394-0.4271.16-2.694
070.399-2.034-2.9610.845
08-3.325-3.9031.365-3.573
09-0.918-2.5840.963-0.1
10-0.737-2.2341.172-1.681