Model info
Transcription factorSOX10
ModelSOX10_HUMAN.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
B
Motif rank
0
ConsensusvARdRvvnbYWTTGTb
Best auROC (human)0.9103856237205874
Best auROC (mouse)0.7632036591325587
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)3
Aligned words500
TF familySOX-related factors{4.1.1}
TF subfamilyGroup E{4.1.1.5}
HGNC11190
EntrezGene6663
UniProt IDSOX10_HUMAN
UniProt ACP56693
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.47666
0.0005 6.42291
0.0001 8.37791
GTEx tissue expression atlas SOX10 expression
ReMap ChIP-seq dataset list SOX10 datasets
Motifs in JASPAR
PCM
ACGT
01190.0201.084.025.0
02444.032.016.08.0
03385.016.060.039.0
04240.016.0125.0119.0
05162.039.0273.026.0
06139.082.0251.028.0
07184.0106.0152.058.0
08146.074.0161.0119.0
0925.0146.0202.0127.0
1025.0399.023.053.0
11253.022.06.0219.0
1214.037.018.0431.0
133.011.03.0483.0
1427.010.0463.00.0
1531.01.06.0462.0
1669.091.090.0250.0
PWM
ACGT
010.4150.47-0.392-1.561
021.259-1.328-1.975-2.584
031.117-1.975-0.721-1.138
040.646-1.9750.0-0.049
050.256-1.1380.774-1.525
060.105-0.4150.691-1.454
070.383-0.1630.193-0.754
080.154-0.5160.25-0.049
09-1.5610.1540.4750.016
10-1.5611.152-1.64-0.841
110.699-1.681-2.8190.555
12-2.096-1.189-1.8681.229
13-3.325-2.311-3.3251.343
14-1.489-2.3941.3-4.4
15-1.358-3.903-2.8191.298
16-0.584-0.313-0.3240.687