Model info
Transcription factorSox10
ModelSOX10_MOUSE.H11MO.0.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
B
Motif rank
0
ConsensusvARdRvvnbYWTTGTb
Best auROC (human)0.9103856237205874
Best auROC (mouse)0.7632036591325587
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)3
Aligned words500
TF family
TF subfamily
MGI98358
EntrezGene20665
UniProt IDSOX10_MOUSE
UniProt ACQ04888
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.39266
0.0005 6.33586
0.0001 8.28051
GTEx tissue expression atlas Sox10 expression
Motifs in JASPAR
PCM
ACGT
01190.0201.084.025.0
02444.032.016.08.0
03385.016.060.039.0
04240.016.0125.0119.0
05162.039.0273.026.0
06139.082.0251.028.0
07184.0106.0152.058.0
08146.074.0161.0119.0
0925.0146.0202.0127.0
1025.0399.023.053.0
11253.022.06.0219.0
1214.037.018.0431.0
133.011.03.0483.0
1427.010.0463.00.0
1531.01.06.0462.0
1669.091.090.0250.0
PWM
ACGT
010.4150.47-0.392-1.561
021.259-1.328-1.975-2.584
031.117-1.975-0.721-1.138
040.646-1.9750.0-0.049
050.256-1.1380.774-1.525
060.105-0.4150.691-1.454
070.383-0.1630.193-0.754
080.154-0.5160.25-0.049
09-1.5610.1540.4750.016
10-1.5611.152-1.64-0.841
110.699-1.681-2.8190.555
12-2.096-1.189-1.8681.229
13-3.325-2.311-3.3251.343
14-1.489-2.3941.3-4.4
15-1.358-3.903-2.8191.298
16-0.584-0.313-0.3240.687