Model info
Transcription factorSox10
ModelSOX10_MOUSE.H11MO.1.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
A
Motif rank
1
ConsensusbbCWTTGTbbn
Best auROC (human)0.819833452237329
Best auROC (mouse)0.8309319571997772
Peak sets in benchmark (human)3
Peak sets in benchmark (mouse)3
Aligned words505
TF family
TF subfamily
MGI98358
EntrezGene20665
UniProt IDSOX10_MOUSE
UniProt ACQ04888
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.6321650000000005
0.0005 6.483575
0.0001 8.099895
GTEx tissue expression atlas Sox10 expression
Motifs in JASPAR
PCM
ACGT
0130.0153.0167.0150.0
0218.0237.0104.0141.0
035.0463.08.024.0
04104.024.03.0369.0
051.036.023.0440.0
065.04.015.0476.0
075.087.0403.05.0
0811.04.04.0481.0
0914.0131.0138.0217.0
1038.0225.043.0194.0
1179.0135.099.0187.0
PWM
ACGT
01-1.3890.20.2870.18
02-1.8680.634-0.1810.119
03-2.9611.3-2.584-1.6
04-0.181-1.6-3.3251.074
05-3.903-1.215-1.641.25
06-2.961-3.126-2.0341.328
07-2.961-0.3571.162-2.961
08-2.311-3.126-3.1261.338
09-2.0960.0460.0980.546
10-1.1630.582-1.0440.435
11-0.4520.076-0.230.399